RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 HPCAL4Q9UM19 191 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 NFU1Q9UMS0 254 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 FAF1Q9UNN5 650 aaPredicted RBP5.69□□□□□ -1.5
KDM3A-214ENST00000491383 KCNJ14Q9UNX9 436 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 CD2APQ9Y5K6 639 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 RPS6KL1Q9Y6S9 549 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 ADCY9O60503 1353 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 CARMIL3Q8ND23 1372 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 RTL9Q8NET4 1388 aa5.69□□□□□ -1.5
KDM3A-214ENST00000491383 B4E1Z4 1266 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CASQ2O14958 399 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 HMGB2P26583 209 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 BIRC3Q13489 604 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 PDE1CQ14123 709 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 APBB1IPQ7Z5R6 666 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 NME8Q8N427 588 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CCT8L2Q96SF2 557 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 IRX2Q9BZI1 471 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 NBPF3Q9H094 633 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 GPBP1L1Q9HC44 474 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 TXLNGQ9NUQ3 528 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 HAUS2Q9NVX0 235 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 PPP1R9AQ9ULJ8 1098 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 PLAAQ9Y263 795 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SHANK3Q9BYB0 1731 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SIPA1L3O60292 1781 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 DNAJC8O75937 253 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SNRPA1P09661 255 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 UQCRFS1P1P0C7P4 283 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SLC5A1P13866 664 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CXCR5P32302 372 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 GUCY1A3Q02108 690 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 EHHADHQ08426 723 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 FOXD4Q12950 439 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CCDC152Q4G0S7 254 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SWT1Q5T5J6 900 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 COPS6Q7L5N1 327 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 UBL4BQ8N7F7 174 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 RETREG2Q8NC44 543 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 XAGE3Q8WTP9 111 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ZNF473Q8WTR7 871 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 RIN2Q8WYP3 895 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 EAF2Q96CJ1 260 aaPredicted RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 DTNBP1Q96EV8 351 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 IL17RAQ96F46 866 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 BORCS6Q96GS4 357 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ELAC2Q9BQ52 826 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SLC40A1Q9NP59 571 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 L1RE1Q9UN81 338 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ATP6V0A2Q9Y487 856 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ANO9A1A5B4 782 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 BAG2O95816 211 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 TROVE2P10155 538 aaKnown RBP eCLIP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ZNF76P36508 570 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SV2BQ7L1I2 683 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CCDC125Q86Z20 511 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 EDC3Q96F86 508 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ATP6V1G3Q96LB4 118 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SUGCTQ9HAC7 445 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 HDAC9Q9UKV0 1011 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 RABGAP1Q9Y3P9 1069 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 TSPY2A6NKD2 308 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 ZRANB2O95218 330 aaKnown RBP eCLIP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 PDHA1P08559 390 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 PDE6BP35913 854 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 EIF3BP55884 814 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SLC8A3P57103 927 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 IRX4P78413 519 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 DHX9Q08211 1270 aaKnown RBP5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CUL3Q13618 768 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 TSHZ1Q6ZSZ6 1077 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CCDC65Q8IXS2 484 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 CCDC105Q8IYK2 499 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 KLHDC4Q8TBB5 520 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 KIF9Q9HAQ2 790 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 NLRC4Q9NPP4 1024 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 NDUFB9Q9Y6M9 179 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 SLC4A4Q9Y6R1 1079 aa5.68□□□□□ -1.5
KDM3A-214ENST00000491383 STXBP3O00186 592 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 GTPBP6O43824 516 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 ATP2A2P16615 1042 aaKnown RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 RFC1P35251 1148 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 ADD1P35611 737 aaKnown RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 MDH1P40925 334 aaKnown RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 SMTNP53814 917 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 MRPS25P82663 173 aaKnown RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 RASSF7Q02833 373 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 STXBP4Q6ZWJ1 553 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 SEPT12Q8IYM1 358 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 ZNF444Q8N0Y2 327 aaPredicted RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 ATL2Q8NHH9 583 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 UHMK1Q8TAS1 419 aaKnown RBP5.67□□□□□ -1.5
KDM3A-214ENST00000491383 HAUS1Q96CS2 278 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 HOOK2Q96ED9 719 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 CFAP57Q96MR6 1250 aa5.67□□□□□ -1.5
KDM3A-214ENST00000491383 LRWD1Q9UFC0 647 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms