RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ADD3Q9UEY8 706 aaKnown RBP9.63□□□□□ -0.87
HDAC6-221ENST00000477561 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ATP11BQ9Y2G3 1177 aa9.63□□□□□ -0.87
HDAC6-221ENST00000477561 ABCB11O95342 1321 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 CCDC69A6NI79 296 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 SH2B2O14492 632 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-221ENST00000477561 PPP1R11O60927 126 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-221ENST00000477561 DUSP11O75319 330 aaKnown RBP9.62□□□□□ -0.87
HDAC6-221ENST00000477561 C6orf222P0C671 652 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-221ENST00000477561 RXRAP19793 462 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 RTP1P59025 263 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 BEX3Q00994 111 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 TNFAIP2Q03169 654 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 KCNA10Q16322 511 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 TAPT1Q6NXT6 567 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 TAAR1Q96RJ0 339 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 PHF24Q9UPV7 400 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 MRPL11Q9Y3B7 192 aaKnown RBP9.62□□□□□ -0.87
HDAC6-221ENST00000477561 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
HDAC6-221ENST00000477561 MCM3APO60318 1980 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 A0A1W2PQ45 241 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-221ENST00000477561 A0A1W2PQY0 241 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 ZBTB5O15062 677 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 DYNC1LI2O43237 492 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-221ENST00000477561 CYTH3O43739 400 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 CFBP00751 764 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 SMPD1P17405 629 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 ACLYP53396 1101 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 PDE4DQ08499 809 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 TRIM60Q495X7 471 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
HDAC6-221ENST00000477561 KLHDC9Q8NEP7 349 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-221ENST00000477561 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 MTMR8Q96EF0 704 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 NEK1Q96PY6 1258 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 RIOX1Q9H6W3 641 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 UPF2Q9HAU5 1272 aaKnown RBP9.61□□□□□ -0.87
HDAC6-221ENST00000477561 SPC25Q9HBM1 224 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 COL20A1Q9P218 1284 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 PCDHA1Q9Y5I3 950 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 CEP290O15078 2479 aa9.61□□□□□ -0.87
HDAC6-221ENST00000477561 LCTP09848 1927 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 CTAGE5O15320 804 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 PLEKHA8P1O95397 391 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 ASGR1P07306 291 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 CPA1P15085 419 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 MAGEA10P43363 369 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 GJA9P57773 515 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 GNASQ5JWF2 1037 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 IQSEC1Q6DN90 963 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 CCSAPQ6IQ19 270 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 MCF2L2Q86YR7 1114 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 RGS22Q8NE09 1264 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 CTCFLQ8NI51 663 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 MORC4Q8TE76 937 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 WDR11Q9BZH6 1224 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 VTA1Q9NP79 307 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 PRDM5Q9NQX1 630 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
HDAC6-221ENST00000477561 SLC12A7Q9Y666 1083 aa9.6□□□□□ -0.87
HDAC6-221ENST00000477561 PNMA6FA0A0J9YX94 578 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 OPLAHO14841 1288 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 PQBP1O60828 265 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 DDAH1O94760 285 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 EIF2AK2P19525 551 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 HOXA13P31271 388 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 KIF5BP33176 963 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 LIFRP42702 1097 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 TLE2Q04725 743 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 ARHGEF16Q5VV41 709 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 SH3RF1Q7Z6J0 888 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 TLK2Q86UE8 772 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 TMTC2Q8N394 836 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 SRBD1Q8N5C6 995 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 DNERQ8NFT8 737 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 COPS5Q92905 334 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 RMDN3Q96TC7 470 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 MPHOSPH6Q99547 160 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 GDF15Q99988 308 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 MTA3Q9BTC8 594 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 UPF3AQ9H1J1 476 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 PRO3102Q9H379 93 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 STARD7Q9NQZ5 370 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 PRKAG2Q9UGJ0 569 aa9.59□□□□□ -0.87
HDAC6-221ENST00000477561 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
HDAC6-221ENST00000477561 hCG_1642624A0A1W2PR95 340 aa9.58□□□□□ -0.88
HDAC6-221ENST00000477561 MOXD2PA6NHM9 499 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms