RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 NCOR1O75376 2440 aa13.25□□□□□ -0.29
ACTB-209ENST00000473257 PTPDC1A2A3K4 754 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 ORC4O43929 436 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 PLA2G6O60733 806 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 FGAP02671 866 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 FGBP02675 491 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 ICAM1P05362 532 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 MYL3P08590 195 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 FDX1P10109 184 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 ALDH5A1P51649 535 aaPredicted RBP13.24□□□□□ -0.29
ACTB-209ENST00000473257 PSRC1Q6PGN9 363 aaPredicted RBP13.24□□□□□ -0.29
ACTB-209ENST00000473257 CLEC4DQ8WXI8 215 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 HERVK_113Q902F9 699 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
ACTB-209ENST00000473257 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
ACTB-209ENST00000473257 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 GOLGA8HP0CJ92 632 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 NOVP48745 357 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 CHMP4BP1P59074 171 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 NMIQ13287 307 aaPredicted RBP13.23□□□□□ -0.29
ACTB-209ENST00000473257 TTLL4Q14679 1199 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 IQSEC1Q6DN90 963 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 TBC1D10CQ8IV04 446 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
ACTB-209ENST00000473257 ZKSCAN3Q9BRR0 538 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 WDR11Q9BZH6 1224 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 ALDH8A1Q9H2A2 487 aaPredicted RBP13.23□□□□□ -0.29
ACTB-209ENST00000473257 RAPGEFL1Q9UHV5 662 aa13.23□□□□□ -0.29
ACTB-209ENST00000473257 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 RFXAPO00287 272 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
ACTB-209ENST00000473257 PDE1AP54750 535 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 CERS4Q9HA82 394 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 VTA1Q9NP79 307 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 MSRAQ9UJ68 235 aa13.22□□□□□ -0.29
ACTB-209ENST00000473257 ZEB2O60315 1214 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 CABYRO75952 493 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 ARHGEF15O94989 841 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 FGRP09769 529 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
ACTB-209ENST00000473257 PDHBP11177 359 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
ACTB-209ENST00000473257 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
ACTB-209ENST00000473257 ALX1Q15699 326 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 USH1GQ495M9 461 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 DUSP28Q4G0W2 176 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 BTNL9Q6UXG8 535 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 TBC1D5Q92609 795 aa13.21□□□□□ -0.29
ACTB-209ENST00000473257 TNKSO95271 1327 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 NEDD4P46934 1319 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 ARIH2O95376 493 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 RPS6P62753 249 aaKnown RBP13.2□□□□□ -0.3
ACTB-209ENST00000473257 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 RAB30Q15771 203 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 NBPF20Q3BBV1 942 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 KRT40Q6A162 431 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
ACTB-209ENST00000473257 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 SLC28A3Q9HAS3 691 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
ACTB-209ENST00000473257 PRRC2BQ5JSZ5 2229 aaKnown RBP13.2□□□□□ -0.3
ACTB-209ENST00000473257 EPOPA6NHQ4 379 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 TRIM6-TRIM34B2RNG4 842 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 PDE4DQ08499 809 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 B4GALNT3Q6L9W6 998 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
ACTB-209ENST00000473257 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 Q9Y3F1 56 aa13.19□□□□□ -0.3
ACTB-209ENST00000473257 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 TFF2Q03403 129 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 THEGQ9P2T0 379 aa13.18□□□□□ -0.3
ACTB-209ENST00000473257 ADD3Q9UEY8 706 aaKnown RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
ACTB-209ENST00000473257 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
ACTB-209ENST00000473257 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
ACTB-209ENST00000473257 SORBS3O60504 671 aa13.17□□□□□ -0.3
ACTB-209ENST00000473257 CA3P07451 260 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms