RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 DCDC2CA8MYV0 355 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 KIAA0355O15063 1070 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
USF1-204ENST00000472217 CDK7P50613 346 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 TRDNQ13061 729 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 PWP2Q15269 919 aaKnown RBP10.54□□□□□ -0.72
USF1-204ENST00000472217 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 TOX2Q96NM4 488 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 AP5M1Q9H0R1 490 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 JMJD4Q9H9V9 463 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 ABCB11O95342 1321 aa10.54□□□□□ -0.72
USF1-204ENST00000472217 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
USF1-204ENST00000472217 E7EWF7 191 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
USF1-204ENST00000472217 RAG1P15918 1043 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 EDNRBP24530 442 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 PDE4DQ08499 809 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 SHHQ15465 462 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 FSCN1Q16658 493 aaKnown RBP10.53□□□□□ -0.72
USF1-204ENST00000472217 DUSP28Q4G0W2 176 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 C9orf50Q5SZB4 431 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 CXCL17Q6UXB2 119 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 KIAA1211Q6ZU35 1233 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
USF1-204ENST00000472217 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 MAP4K1Q92918 833 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 Q9Y3F1 56 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 MROH7Q68CQ1 1323 aa10.53□□□□□ -0.72
USF1-204ENST00000472217 MYH6P13533 1939 aa10.52□□□□□ -0.72
USF1-204ENST00000472217 RBM47A0AV96 593 aaKnown RBP10.52□□□□□ -0.73
USF1-204ENST00000472217 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 ARVCFO00192 962 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 IFIT3O14879 490 aaKnown RBP10.52□□□□□ -0.73
USF1-204ENST00000472217 ANTXR2P58335 489 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 Q7L0L9 218 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 SKAP1Q86WV1 359 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 NCOA7Q8NI08 942 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 MPHOSPH6Q99547 160 aaKnown RBP10.52□□□□□ -0.73
USF1-204ENST00000472217 WDR11Q9BZH6 1224 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 COL20A1Q9P218 1284 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
USF1-204ENST00000472217 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.73
USF1-204ENST00000472217 ERICH2A1L162 156 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 PALM3A6NDB9 673 aaPredicted RBP10.51□□□□□ -0.73
USF1-204ENST00000472217 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
USF1-204ENST00000472217 CABYRO75952 493 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 EPHB4P54760 987 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 PSMC6P62333 389 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 FPGSQ05932 587 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 GRM4Q14833 912 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 SLC35G1Q2M3R5 365 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 MCF2L2Q86YR7 1114 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 MB21D2Q8IYB1 491 aaPredicted RBP10.51□□□□□ -0.73
USF1-204ENST00000472217 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 SLC43A3Q8NBI5 491 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
USF1-204ENST00000472217 MTMR8Q96EF0 704 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 TAAR1Q96RJ0 339 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 MAF1Q9H063 256 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
USF1-204ENST00000472217 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
USF1-204ENST00000472217 B4DLN1 442 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 OPLAHO14841 1288 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 ZBTB5O15062 677 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 TLR3O15455 904 aaKnown RBP10.5□□□□□ -0.73
USF1-204ENST00000472217 ZEB2O60315 1214 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 TIMP1P01033 207 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 CD4P01730 458 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 MRPL12P52815 198 aaKnown RBP10.5□□□□□ -0.73
USF1-204ENST00000472217 TROAPQ12815 778 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 ITGA7Q13683 1181 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 WTAPQ15007 396 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 SART3Q15020 963 aaKnown RBP10.5□□□□□ -0.73
USF1-204ENST00000472217 PPP2R5BQ15173 497 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 CENPQQ7L2Z9 268 aaPredicted RBP10.5□□□□□ -0.73
USF1-204ENST00000472217 OR6J1Q8NGC5 347 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 SCFD2Q8WU76 684 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 AMNQ9BXJ7 453 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 LSG1Q9H089 658 aaKnown RBP10.5□□□□□ -0.73
USF1-204ENST00000472217 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
USF1-204ENST00000472217 SZT2Q5T011 3432 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 NKRFO15226 690 aaKnown RBP eCLIP10.49□□□□□ -0.73
USF1-204ENST00000472217 ARIH2O95376 493 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms