RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 RNF208Q9H0X6 261 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 SH2B1Q9NRF2 756 aaPredicted RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 MRPL11Q9Y3B7 192 aaKnown RBP17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 PCDHA1Q9Y5I3 950 aa17.26■□□□□ 0.35
CDC42SE1-203ENST00000470278 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 NFIBO00712 420 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 ADCY3O60266 1144 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 INHAP05111 366 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 TEX2Q8IWB9 1127 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 PXYLP1Q8TE99 480 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
CDC42SE1-203ENST00000470278 OPLAHO14841 1288 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 ST3GAL1Q11201 340 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 PFKFB3Q16875 520 aaPredicted RBP17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 MCF2L2Q86YR7 1114 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 TRMT44Q8IYL2 757 aaKnown RBP17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 PHKBQ93100 1093 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 SLC5A4Q9NY91 659 aa17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 V9GY48 417 aaPredicted RBP17.24■□□□□ 0.35
CDC42SE1-203ENST00000470278 A0A0C4DFX4 3053 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 FARP2O94887 1054 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 IGHA2P01877 340 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 SCG2P13521 617 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 PKN1Q16512 942 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 WWC2Q6AWC2 1192 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
CDC42SE1-203ENST00000470278 hCG_1642624A0A1W2PR95 340 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 COBLO75128 1261 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 DEXIO95424 95 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 SGPL1O95470 568 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 HSD17B4P51659 736 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 TRIM32Q13049 653 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 ZNF467Q7Z7K2 595 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 FAM133AQ8N9E0 248 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 DIS3LQ8TF46 1054 aaKnown RBP17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 CUL9Q8IWT3 2517 aa17.22■□□□□ 0.35
CDC42SE1-203ENST00000470278 LRRC37A2A6NM11 1700 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 LOC102724159A0A0B4J2E5 919 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 POTEB2H3BUK9 544 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 STXBP3O00186 592 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 PIK3CDO00329 1044 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 PGK2P07205 417 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 CYP2B6P20813 491 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 RPS6P62753 249 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 PWP2Q15269 919 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 NSMFQ6X4W1 530 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 MSL3Q8N5Y2 521 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.355e-8■■□□□ 14
CDC42SE1-203ENST00000470278 MAML3Q96JK9 1138 aa17.21■□□□□ 0.35
CDC42SE1-203ENST00000470278 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 UBXN2AP68543 259 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 BAATQ14032 418 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 NPLOC4Q8TAT6 608 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 TRIB2Q92519 343 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 FGD4Q96M96 766 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 DEFB118Q96PH6 123 aa17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 BIN2Q9UBW5 565 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE1-203ENST00000470278 HMGCRP04035 888 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 DNERQ8NFT8 737 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 SYTL5Q8TDW5 730 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms