RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CYP2C18P33260 490 aa15.59■□□□□ 0.09
CPSF4-210ENST00000469897 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
CPSF4-210ENST00000469897 RNF207Q6ZRF8 634 aa15.59■□□□□ 0.09
CPSF4-210ENST00000469897 TRPV6Q9H1D0 765 aa15.59■□□□□ 0.09
CPSF4-210ENST00000469897 RPS6P62753 249 aaKnown RBP15.58■□□□□ 0.08
CPSF4-210ENST00000469897 PPIGQ13427 754 aaKnown RBP eCLIP15.58■□□□□ 0.082e-7■■□□□ 11.8
CPSF4-210ENST00000469897 DUSP28Q4G0W2 176 aa15.58■□□□□ 0.08
CPSF4-210ENST00000469897 ZNF365Q70YC5 407 aa15.58■□□□□ 0.08
CPSF4-210ENST00000469897 MYLIPQ8WY64 445 aa15.58■□□□□ 0.08
CPSF4-210ENST00000469897 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.08
CPSF4-210ENST00000469897 ZNFX1Q9P2E3 1918 aaKnown RBP15.57■□□□□ 0.08
CPSF4-210ENST00000469897 SMCHD1A6NHR9 2005 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 RBM47A0AV96 593 aaKnown RBP15.57■□□□□ 0.08
CPSF4-210ENST00000469897 B4E1Z4 1266 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 HIP1O00291 1037 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 PDE4DQ08499 809 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 USH1GQ495M9 461 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 GPATCH4Q5T3I0 446 aaKnown RBP15.57■□□□□ 0.08
CPSF4-210ENST00000469897 IQCA1Q86XH1 822 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 PNMA1Q8ND90 353 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 TBC1D5Q92609 795 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 ZSCAN10Q96SZ4 725 aaPredicted RBP15.57■□□□□ 0.08
CPSF4-210ENST00000469897 KAT14Q9H8E8 782 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 PNMA2Q9UL42 364 aa15.57■□□□□ 0.08
CPSF4-210ENST00000469897 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
CPSF4-210ENST00000469897 GRXCR1A8MXD5 290 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 B4GALT4O60513 344 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 CCL23P55773 120 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 IMMTQ16891 758 aaKnown RBP15.56■□□□□ 0.08
CPSF4-210ENST00000469897 CCDC178Q5BJE1 867 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
CPSF4-210ENST00000469897 ADGRF4Q8IZF3 695 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 ANKS1AQ92625 1134 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 DSCC1Q9BVC3 393 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 HIPK3Q9H422 1215 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 UMODL1Q5DID0 1318 aa15.56■□□□□ 0.08
CPSF4-210ENST00000469897 WDR19Q8NEZ3 1342 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 FGBP02675 491 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 MYL3P08590 195 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 DNAJB2P25686 324 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 GRIN2CQ14957 1233 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
CPSF4-210ENST00000469897 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 OR6J1Q8NGC5 347 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 MAFAQ8NHW3 353 aaPredicted RBP15.55■□□□□ 0.08
CPSF4-210ENST00000469897 COPS5Q92905 334 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 IL23AQ9NPF7 189 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 GPHNQ9NQX3 736 aaPredicted RBP15.55■□□□□ 0.08
CPSF4-210ENST00000469897 COL6A3P12111 3177 aa15.55■□□□□ 0.08
CPSF4-210ENST00000469897 TXNP10599 105 aaKnown RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 PDE4AP27815 886 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 PBX2P40425 430 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 CDC37Q16543 378 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 ENAHQ8N8S7 591 aaPredicted RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 PPP1R13LQ8WUF5 828 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 TIFAQ96CG3 184 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 TAAR1Q96RJ0 339 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 MPHOSPH6Q99547 160 aaKnown RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 NOC4LQ9BVI4 516 aaKnown RBP15.54■□□□□ 0.08
CPSF4-210ENST00000469897 SEZ6LQ9BYH1 1024 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 IL25Q9H293 177 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
CPSF4-210ENST00000469897 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 TNKSO95271 1327 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 LTBP2Q14767 1821 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 TMEM265A0A087WTH1 108 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 B4DLN1 442 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 DHX16O60231 1041 aaKnown RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 FOSL2P15408 326 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 EDNRBP24530 442 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 NT5C2P49902 561 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 CPT1AP50416 773 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 PSRC1Q6PGN9 363 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 PBX4Q9BYU1 374 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 KRT23Q9C075 422 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 ALDH8A1Q9H2A2 487 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 ZNF576Q9H609 170 aa15.53■□□□□ 0.08
CPSF4-210ENST00000469897 TRMT13Q9NUP7 481 aaKnown RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 CXXC1Q9P0U4 656 aaPredicted RBP15.53■□□□□ 0.08
CPSF4-210ENST00000469897 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
CPSF4-210ENST00000469897 CYP2C9P11712 490 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 PPP2R5BQ15173 497 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 QRICH1Q2TAL8 776 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 NBPF20Q3BBV1 942 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 ASPRV1Q53RT3 343 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 SYTL5Q8TDW5 730 aaPredicted RBP15.52■□□□□ 0.08
CPSF4-210ENST00000469897 SCFD2Q8WU76 684 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 SCLYQ96I15 445 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
CPSF4-210ENST00000469897 MTG1Q9BT17 334 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms