RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 HPS3Q969F9 1004 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 FAM84BQ96KN1 310 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 OSBPL9Q96SU4 736 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 CAPS2Q9BXY5 557 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 IFIH1Q9BYX4 1025 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 PLAGL2Q9UPG8 496 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 STRCQ7RTU9 1775 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 TSPY2A6NKD2 308 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 TACC1O75410 805 aa14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 MATR3P43243 847 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDZRN3-205ENST00000466780 EIF3HO15372 352 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 CXCR5P32302 372 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 CRKLP46109 303 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 KIF11P52732 1056 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 MECOMQ03112 1051 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 TXNRD1Q16881 649 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 PARP10Q53GL7 1025 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 HAUS3Q68CZ6 603 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 C2CD5Q86YS7 1000 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 CERS3Q8IU89 383 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 GPIHBP1Q8IV16 184 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 FAM114A1Q8IWE2 563 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 ARL8AQ96BM9 186 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 PSMB7Q99436 277 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 IL17RBQ9NRM6 502 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 CCDC87Q9NVE4 849 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 NIP7Q9Y221 180 aaKnown RBP eCLIP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 SIK3Q9Y2K2 1263 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 LAMB1P07942 1786 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 MYH1P12882 1939 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 SCN7AQ01118 1682 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 LCA5LO95447 670 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 ADAMTS2O95450 1211 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 EIF4A3P38919 411 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 GNGT1P63211 74 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 UBE4AQ14139 1066 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 SLC4A8Q2Y0W8 1093 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 TTMPQ5BVD1 217 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 TTC19Q6DKK2 380 aaPredicted RBP14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 C3orf67Q6ZVT6 689 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 CABP7Q86V35 215 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 RUBCNQ92622 972 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 SEMA6BQ9H3T3 888 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 SALL4Q9UJQ4 1053 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 TAF1P21675 1872 aa14.45□□□□□ -0.1
PDZRN3-205ENST00000466780 GOLGA8KD6RF30 607 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 NCK2O43639 380 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 CYTH3O43739 400 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 PRPHP41219 470 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 GTF2A1P52655 376 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 ASIC1P78348 528 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 FKBP15Q5T1M5 1219 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 ANKRD18AQ8IVF6 992 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 MICALL1Q8N3F8 863 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 DAGLBQ8NCG7 672 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 BCAS4Q8TDM0 211 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 C7orf25Q9BPX7 421 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 FAM169AQ9Y6X4 670 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 PNMA1Q8ND90 353 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 KAT2BQ92831 832 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 CUEDC2Q9H467 287 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 HYOU1Q9Y4L1 999 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 KIAA1551Q9HCM1 1747 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 LAMB2P55268 1798 aa14.44□□□□□ -0.1
PDZRN3-205ENST00000466780 STXBP3O00186 592 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 EBAG9O00559 213 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 EPB41P11171 864 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 KLRK1P26718 216 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 EPHB4P54760 987 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 SBK1Q52WX2 424 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 GBP6Q6ZN66 633 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 STIM2Q9P246 746 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 MAD2L2Q9UI95 211 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 LAD1O00515 517 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 TCP1P17987 556 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 LIG3P49916 1009 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 TFAP4Q01664 338 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 GRM4Q14833 912 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 DDB1Q16531 1140 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 HEATR3Q7Z4Q2 680 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 FAM107BQ9H098 131 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 ATP8A2Q9NTI2 1148 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 ARPP21Q9UBL0 812 aaPredicted RBP14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 OPA1O60313 960 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 VWA3BQ502W6 1294 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 EMBQ6PCB8 327 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 ANKRD13CQ8N6S4 541 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 CCDC47Q96A33 483 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 RBM12Q9NTZ6 932 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-205ENST00000466780 LOC102724428A0A0B4J2F2 783 aa14.42□□□□□ -0.1
PDZRN3-205ENST00000466780 USP17L8P0C7I0 530 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms