RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 FRMPD2Q68DX3 1309 aaPredicted RBP22.21■■□□□ 1.15
SRSF4-202ENST00000466448 MUC3AQ02505 3323 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 A0A0D9SFI3 127 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 FGAP02671 866 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 ADGRE1Q14246 886 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 RRP12Q5JTH9 1297 aaKnown RBP22.2■■□□□ 1.14
SRSF4-202ENST00000466448 PPM1EQ8WY54 764 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 WDR11Q9BZH6 1224 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 ALDH8A1Q9H2A2 487 aaPredicted RBP22.2■■□□□ 1.14
SRSF4-202ENST00000466448 GPCPD1Q9NPB8 672 aa22.2■■□□□ 1.14
SRSF4-202ENST00000466448 YBX2Q9Y2T7 364 aaKnown RBP22.2■■□□□ 1.14
SRSF4-202ENST00000466448 PTPDC1A2A3K4 754 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 PDE1AP54750 535 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 AKNAD1Q5T1N1 836 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 SLC30A10Q6XR72 485 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 VWCEQ96DN2 955 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 NKX2-4Q9H2Z4 354 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 TCP11L1Q9NUJ3 509 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 ZBTB47Q9UFB7 747 aaPredicted RBP22.19■■□□□ 1.14
SRSF4-202ENST00000466448 LCTP09848 1927 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 TTC28Q96AY4 2481 aa22.19■■□□□ 1.14
SRSF4-202ENST00000466448 LOC102724159A0A0B4J2E5 919 aa22.18■■□□□ 1.14
SRSF4-202ENST00000466448 PURAQ00577 322 aaKnown RBP22.18■■□□□ 1.14
SRSF4-202ENST00000466448 PWP2Q15269 919 aaKnown RBP22.18■■□□□ 1.14
SRSF4-202ENST00000466448 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
SRSF4-202ENST00000466448 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
SRSF4-202ENST00000466448 SCLYQ96I15 445 aa22.18■■□□□ 1.14
SRSF4-202ENST00000466448 SLC28A3Q9HAS3 691 aa22.18■■□□□ 1.14
SRSF4-202ENST00000466448 TRMT13Q9NUP7 481 aaKnown RBP22.18■■□□□ 1.14
SRSF4-202ENST00000466448 RBM47A0AV96 593 aaKnown RBP22.17■■□□□ 1.14
SRSF4-202ENST00000466448 PDHBP11177 359 aa22.17■■□□□ 1.14
SRSF4-202ENST00000466448 CALML3P27482 149 aa22.17■■□□□ 1.14
SRSF4-202ENST00000466448 ZNF589Q86UQ0 364 aaPredicted RBP22.17■■□□□ 1.14
SRSF4-202ENST00000466448 POLR3EQ9NVU0 708 aa22.17■■□□□ 1.14
SRSF4-202ENST00000466448 ZMYM6O95789 1325 aa22.16■■□□□ 1.14
SRSF4-202ENST00000466448 HSPD1P10809 573 aaKnown RBP22.16■■□□□ 1.14
SRSF4-202ENST00000466448 CPT1AP50416 773 aa22.16■■□□□ 1.14
SRSF4-202ENST00000466448 RABGGTBP53611 331 aa22.16■■□□□ 1.14
SRSF4-202ENST00000466448 RNF207Q6ZRF8 634 aa22.16■■□□□ 1.14
SRSF4-202ENST00000466448 RPUSD2Q8IZ73 545 aaKnown RBP22.16■■□□□ 1.14
SRSF4-202ENST00000466448 TNKSO95271 1327 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 MYL3P08590 195 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 SUPT20HL2P0C7V6 817 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 CYP2C9P11712 490 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 IGFBP4P22692 258 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 RRP1P56182 461 aaKnown RBP22.15■■□□□ 1.14
SRSF4-202ENST00000466448 HAND2P61296 217 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 ZNF543Q08ER8 600 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 NMIQ13287 307 aaPredicted RBP22.15■■□□□ 1.14
SRSF4-202ENST00000466448 OR6J1Q8NGC5 347 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 SLC4A7Q9Y6M7 1214 aa22.15■■□□□ 1.14
SRSF4-202ENST00000466448 SNHG28P0DPA3 235 aa22.14■■□□□ 1.13
SRSF4-202ENST00000466448 RPS6P62753 249 aaKnown RBP22.14■■□□□ 1.13
SRSF4-202ENST00000466448 PDE4DQ08499 809 aa22.14■■□□□ 1.13
SRSF4-202ENST00000466448 CCDC85BQ15834 202 aaPredicted RBP22.14■■□□□ 1.13
SRSF4-202ENST00000466448 TBC1D10CQ8IV04 446 aa22.14■■□□□ 1.13
SRSF4-202ENST00000466448 ATXN2LQ8WWM7 1075 aaKnown RBP22.14■■□□□ 1.13
SRSF4-202ENST00000466448 THEGQ9P2T0 379 aa22.14■■□□□ 1.13
SRSF4-202ENST00000466448 WDR19Q8NEZ3 1342 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 ZBBXA8MT70 800 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 MYOGP15173 224 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 EDNRBP24530 442 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 TTLL4Q14679 1199 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 PPP2R5BQ15173 497 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 TICAM2Q86XR7 235 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 TTC14Q96N46 770 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 CRBNQ96SW2 442 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 MTG1Q9BT17 334 aaPredicted RBP22.13■■□□□ 1.13
SRSF4-202ENST00000466448 GPHNQ9NQX3 736 aaPredicted RBP22.13■■□□□ 1.13
SRSF4-202ENST00000466448 PNMA2Q9UL42 364 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 CHD7Q9P2D1 2997 aa22.13■■□□□ 1.13
SRSF4-202ENST00000466448 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 TNFRSF10AO00220 468 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 PFKMP08237 780 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 ATP2A2P16615 1042 aaKnown RBP22.12■■□□□ 1.13
SRSF4-202ENST00000466448 HDAC1Q13547 482 aaPredicted RBP22.12■■□□□ 1.13
SRSF4-202ENST00000466448 NBPF20Q3BBV1 942 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 FAM47CQ5HY64 1035 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 PPP2R2DQ66LE6 453 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 MFSD6Q6ZSS7 791 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 DNERQ8NFT8 737 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 PPP1R13LQ8WUF5 828 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 ASB2Q96Q27 587 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 PCDHA11Q9Y5I1 949 aa22.12■■□□□ 1.13
SRSF4-202ENST00000466448 NKRFO15226 690 aaKnown RBP eCLIP22.11■■□□□ 1.13
SRSF4-202ENST00000466448 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
SRSF4-202ENST00000466448 DEFB128Q7Z7B8 93 aa22.11■■□□□ 1.13
SRSF4-202ENST00000466448 SCFD2Q8WU76 684 aa22.11■■□□□ 1.13
SRSF4-202ENST00000466448 COPS5Q92905 334 aa22.11■■□□□ 1.13
SRSF4-202ENST00000466448 MPHOSPH6Q99547 160 aaKnown RBP22.11■■□□□ 1.13
SRSF4-202ENST00000466448 NEDD4P46934 1319 aa22.1■■□□□ 1.13
SRSF4-202ENST00000466448 RAD50Q92878 1312 aa22.1■■□□□ 1.13
SRSF4-202ENST00000466448 A6NJR5 290 aa22.1■■□□□ 1.13
SRSF4-202ENST00000466448 GOLGA8HP0CJ92 632 aa22.1■■□□□ 1.13
SRSF4-202ENST00000466448 BRDTQ58F21 947 aaPredicted RBP22.1■■□□□ 1.13
SRSF4-202ENST00000466448 TRIM6-TRIM34B2RNG4 842 aa22.09■■□□□ 1.13
SRSF4-202ENST00000466448 TXNP10599 105 aaKnown RBP22.09■■□□□ 1.13
SRSF4-202ENST00000466448 USH1GQ495M9 461 aa22.09■■□□□ 1.13
SRSF4-202ENST00000466448 NFRKBQ6P4R8 1299 aa22.09■■□□□ 1.13
SRSF4-202ENST00000466448 ZKSCAN3Q9BRR0 538 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms