RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CCDC170Q8IYT3 715 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC42Q96M95 316 aa13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
PDZRN3-203ENST00000462146 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 TOM1O60784 492 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 CALML3P27482 149 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 ASIC1P78348 528 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 KIAA0895Q8NCT3 520 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 IFIH1Q9BYX4 1025 aaKnown RBP13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 TRIM9Q9C026 710 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 EXOC5O00471 708 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 CABP7Q86V35 215 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 PNMA1Q8ND90 353 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 SPATA4Q8NEY3 305 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 SLC39A2Q9NP94 309 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 PCDHA13Q9Y5I0 950 aa13.07□□□□□ -0.32
PDZRN3-203ENST00000462146 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 KIF11P52732 1056 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 TFAP4Q01664 338 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 TTMPQ5BVD1 217 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 MMGT1Q8N4V1 131 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 OSBPL9Q96SU4 736 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 NUP58Q9BVL2 599 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 SPA17Q15506 151 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 MS4A14Q96JA4 679 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC87Q9NVE4 849 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 LIG3P49916 1009 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 GNGT1P63211 74 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CAVIN4Q5BKX8 364 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 ANKRD18AQ8IVF6 992 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 SH2D3CQ8N5H7 860 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 KAT2BQ92831 832 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 ERGIC2Q96RQ1 377 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 CAPS2Q9BXY5 557 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 SAMM50Q9Y512 469 aa13.06□□□□□ -0.32
PDZRN3-203ENST00000462146 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 BUB1O43683 1085 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 KIF5BP33176 963 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ICE2Q659A1 982 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 EFCAB13Q8IY85 973 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 TRIM58Q8NG06 486 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 MINPP1Q9UNW1 487 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 LRRC53A6NM62 1247 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 UBAP1LF5GYI3 381 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 STXBP3O00186 592 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ZPR1O75312 459 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 TACC1O75410 805 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 TECP42680 631 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 DNA2P51530 1060 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 RBM12Q9NTZ6 932 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 SIK3Q9Y2K2 1263 aa13.05□□□□□ -0.32
PDZRN3-203ENST00000462146 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 GFPT1Q06210 699 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 PPFIA1Q13136 1202 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 ITPK1Q13572 414 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 KCTD16Q68DU8 428 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 SLC51AQ86UW1 340 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 SH3GL2Q99962 352 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
PDZRN3-203ENST00000462146 FAM169AQ9Y6X4 670 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms