RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 RNF180Q86T96 592 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 FOXP4Q8IVH2 680 aaPredicted RBP2.64□□□□□ -1.99
NEDD1-204ENST00000457368 GJD3Q8N144 294 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 PHOSPHO2Q8TCD6 241 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 MFSD14AQ96MC6 490 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 UPF3AQ9H1J1 476 aaKnown RBP2.64□□□□□ -1.99
NEDD1-204ENST00000457368 DHX36Q9H2U1 1008 aaKnown RBP2.64□□□□□ -1.99
NEDD1-204ENST00000457368 NKX2-4Q9H2Z4 354 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 C1orf115Q9H7X2 142 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 SLC28A3Q9HAS3 691 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 CD320Q9NPF0 282 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 SLC5A4Q9NY91 659 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 PRKAG3Q9UGI9 489 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 SERTAD1Q9UHV2 236 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 DENND2AQ9ULE3 1009 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 MAP4K5Q9Y4K4 846 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 MROH7-TTC4A0A0A0MT08 1334 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 BDP1A6H8Y1 2624 aa2.64□□□□□ -1.99
NEDD1-204ENST00000457368 DCXO43602 365 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CD4P01730 458 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PDIA4P13667 645 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 IGFBP4P22692 258 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PRDX5P30044 214 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CYP2C19P33261 490 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ABL2P42684 1182 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 TSGA10IPQ3SY00 556 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ZNF365Q70YC5 407 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 TSPYL6Q8N831 410 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 MB21D1Q8N884 522 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 VWCEQ96DN2 955 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PCMTD1Q96MG8 357 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 KIAA1683Q9H0B3 1180 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 LAS1LQ9Y4W2 734 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 FAM86C2PA6NEL3 165 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ZBBXA8MT70 800 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 GRXCR1A8MXD5 290 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PLIN1O60240 522 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CIAO1O76071 339 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ZNF865P0CJ78 1059 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 RARBP10826 455 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ACLYP53396 1101 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 USP14P54578 494 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CCDC85BQ15834 202 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PLA2G4EQ3MJ16 856 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 FAM47AQ5JRC9 791 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 METTL24Q5JXM2 366 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 SPTY2D1Q68D10 685 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CCDC84Q86UT8 332 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CCAR1Q8IX12 1150 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 FAM126BQ8IXS8 530 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ANKRD44Q8N8A2 993 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 NUP133Q8WUM0 1156 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PPM1EQ8WY54 764 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 SCARF2Q96GP6 870 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 TANGO6Q9C0B7 1094 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 NUCKS1Q9H1E3 243 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 MROH8Q9H579 483 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ALG13Q9NP73 1137 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 SNRKQ9NRH2 765 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 GNL3LQ9NVN8 582 aaKnown RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PI4KBQ9UBF8 816 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 DNMT3AQ9Y6K1 912 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 IVNS1ABPQ9Y6Y0 642 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 UNC80Q8N2C7 3258 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ZNF318Q5VUA4 2279 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 TNKSO95271 1327 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CENPFP49454 3210 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ARVCFO00192 962 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 LPXNO60711 386 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 COBLO75128 1261 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 FRAT2O75474 233 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 FGBP02675 491 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 LDHCP07864 332 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 VSIG8P0DPA2 414 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 BMP4P12644 408 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ADORA2AP29274 412 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 COPB2P35606 906 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 RFX5P48382 616 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 LRRC24Q50LG9 513 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 PPP2R2DQ66LE6 453 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 CCDC129Q6ZRS4 1044 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 MAGEB6Q8N7X4 407 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 MAML3Q96JK9 1138 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 SLC9A7Q96T83 725 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 TRIM34Q9BYJ4 488 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 SUV39H2Q9H5I1 410 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 XPNPEP3Q9NQH7 507 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 BTBD7Q9P203 1132 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 ZBTB21Q9ULJ3 1066 aa2.63□□□□□ -1.99
NEDD1-204ENST00000457368 IQSEC3Q9UPP2 1182 aaPredicted RBP2.63□□□□□ -1.99
NEDD1-204ENST00000457368 AK9Q5TCS8 1911 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 A0A0U1RQG5 324 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 EYA2O00167 538 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 MSTNO14793 375 aa2.62□□□□□ -1.99
NEDD1-204ENST00000457368 TLR3O15455 904 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 DUSP11O75319 330 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 HMGB1P09429 215 aaKnown RBP2.62□□□□□ -1.99
NEDD1-204ENST00000457368 AKR1A1P14550 325 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms