RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FAM200BP0CF97 657 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 HCLS1P14317 486 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 EPHA1P21709 976 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 POLD1P28340 1107 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 CDC27P30260 824 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 TRPC1P48995 793 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 EIF5P55010 431 aaKnown RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC8A3P57103 927 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 ST5P78524 1137 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC93Q567U6 631 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC181Q5TID7 509 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 INTS3Q68E01 1043 aaKnown RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 TLDC1Q6P9B6 456 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 ELMSAN1Q6PJG2 1045 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 KRT26Q7Z3Y9 468 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 ANKRD18AQ8IVF6 992 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SAMD3Q8N6K7 520 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 PRPF38AQ8NAV1 312 aaKnown RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZSWIM2Q8NEG5 633 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 BICD2Q8TD16 824 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 GPBAR1Q8TDU6 330 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 TTC9Q92623 222 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 KAT2BQ92831 832 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SYAP1Q96A49 352 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 MDFIQ99750 246 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 FUCA2Q9BTY2 467 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SOX17Q9H6I2 414 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 TTC12Q9H892 705 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SPATS2LQ9NUQ6 558 aaKnown RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 TYW1Q9NV66 732 aaKnown RBP4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 IRAK4Q9NWZ3 460 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 LMCD1Q9NZU5 365 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 FRRS1LQ9P0K9 344 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 CORINQ9Y5Q5 1042 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC12A7Q9Y666 1083 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 SNCAIPQ9Y6H5 919 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 LTBP3Q9NS15 1303 aa4.15□□□□□ -1.75
HMGB3P8-201ENST00000449709 MAP3K5Q99683 1374 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 RPAP1Q9BWH6 1393 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PCF11O94913 1555 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CEP170Q5SW79 1584 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 LAMC3Q9Y6N6 1575 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 SHANK2Q9UPX8 1470 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 SLC22A31A6NKX4 558 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ADARB2-AS1A8MUL3 147 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 H3BRJ5 948 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 EXOC5O00471 708 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 HTATSF1O43719 755 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLIN1O60240 522 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 RTN3O95197 1032 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 TUBB4AP04350 444 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 FAM153BP0C7A2 387 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ACRP10323 421 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 NME1P15531 152 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ALAS2P22557 587 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 HNRNPH1P31943 449 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCNHP51946 323 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CABP4P57796 275 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 DEUP1Q05D60 604 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 INPP5AQ14642 412 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 NCAPHQ15003 741 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 RBBP5Q15291 538 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZRSR1Q15695 479 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZYXQ15942 572 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PKN1Q16512 942 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 LONRF2Q1L5Z9 754 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC178Q5BJE1 867 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 HGSNATQ68CP4 663 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 KLHL10Q6JEL2 608 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 LRFN4Q6PJG9 635 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 VHLLQ6RSH7 139 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 UNC5AQ6ZN44 842 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 C8orf86Q6ZUL3 223 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 EEPD1Q7L9B9 569 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC112Q8NEF3 446 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 OR8K1Q8NGG5 319 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 TBC1D5Q92609 795 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ATG4CQ96DT6 458 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 THOC1Q96FV9 657 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLPPR2Q96GM1 343 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 POLR3CQ9BUI4 534 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 SPATA9Q9BWV2 254 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 NRSN2Q9GZP1 204 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 IQCGQ9H095 443 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 SEMA6BQ9H3T3 888 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 TSPY26PQ9H489 355 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 UTP6Q9NYH9 597 aaKnown RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CHPF2Q9P2E5 772 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 REV1Q9UBZ9 1251 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PCDHA4Q9UN74 947 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PLAAQ9Y263 795 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 EXOC6BQ9Y2D4 811 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 SUGT1Q9Y2Z0 365 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 STARD13Q9Y3M8 1113 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 PPME1Q9Y570 386 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CD2APQ9Y5K6 639 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 TACC3Q9Y6A5 838 aa4.14□□□□□ -1.75
HMGB3P8-201ENST00000449709 CCDC171Q6TFL3 1326 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms