RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 NELFCDQ8IXH7 590 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 CTNND2Q9UQB3 1225 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 MYL5Q02045 173 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 TSGA10IPQ3SY00 556 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 LDHDQ86WU2 507 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 BLZF1Q9H2G9 400 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 KIAA1024Q9UPX6 916 aa15.7■□□□□ 0.1
SMARCA4-204ENST00000444061 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 TAF12Q16514 161 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 CSGALNACT2Q8N6G5 542 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 CLSTN2Q9H4D0 955 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 ADCY5O95622 1261 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 ADPGKQ9BRR6 497 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 PRKAG2Q9UGJ0 569 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 PFKFB1P16118 471 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 NEK11Q8NG66 645 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 ZNF543Q08ER8 600 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 MFSD14CQ5VZR4 134 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 RETREG2Q8NC44 543 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 ZKSCAN4Q969J2 545 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 AK8Q96MA6 479 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 COL4A3BPQ9Y5P4 624 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
SMARCA4-204ENST00000444061 LRRIQ4A6NIV6 560 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 ERO1BQ86YB8 467 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 GTF3C2Q8WUA4 911 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 WNT10BO00744 389 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 NBPF12Q5TAG4 269 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 CMA1P23946 247 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 CAP2P40123 477 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 UBXN1Q04323 297 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 PAK1Q13153 545 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 SLC39A14Q15043 492 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 CLIC6Q96NY7 704 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 SPOUT1Q5T280 376 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 PDXDC2PQ6P474 469 aa15.68■□□□□ 0.1
SMARCA4-204ENST00000444061 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 PSAPP07602 524 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 FKBP1AP62942 108 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 TFDP1Q14186 410 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 SPDYE2Q495Y8 402 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 STAG2Q8N3U4 1231 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 RUFY1Q96T51 708 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 RIOK1Q9BRS2 568 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 NOP2P46087 812 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 DMP1Q13316 513 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 USP50Q70EL3 339 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 SYMPKQ92797 1274 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 ERLIN2O94905 339 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 CEP170P1Q96L14 293 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 NACC1Q96RE7 527 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 KCNQ5Q9NR82 932 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 LIG4P49917 911 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 GTF2A2P52657 109 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 C15orf52Q6ZUT6 534 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 CEP83Q9Y592 693 aa15.67■□□□□ 0.1
SMARCA4-204ENST00000444061 MTMR1Q13613 665 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 EXOC8Q8IYI6 725 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 K7ENM7 598 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 KIF5CO60282 957 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 ARID5AQ03989 594 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 CDC27P30260 824 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 TBC1D8BQ0IIM8 1120 aa15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 GLIS2Q9BZE0 524 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 PARP4Q9UKK3 1724 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-204ENST00000444061 ASB14A6NK59 587 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 VIL1P09327 827 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 Q3C1V9 767 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 ERCC4Q92889 916 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 SPZ1Q9BXG8 430 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 POLR3EQ9NVU0 708 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 BARHL2Q9NY43 387 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 PALM3A6NDB9 673 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 GADD45BO75293 160 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 PROM2Q8N271 834 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 PANK4Q9NVE7 773 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 GPRC5DQ9NZD1 345 aa15.65■□□□□ 0.1
SMARCA4-204ENST00000444061 MACROD2A1Z1Q3 448 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms