RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 MORC4Q8TE76 937 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
ACTB-206ENST00000443528 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 MAF1Q9H063 256 aa18.23■□□□□ 0.51
ACTB-206ENST00000443528 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
ACTB-206ENST00000443528 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
ACTB-206ENST00000443528 ACVR2BQ13705 512 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 MCF2L2Q86YR7 1114 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 CCDC82Q8N4S0 544 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 RRP36Q96EU6 259 aaKnown RBP18.22■□□□□ 0.51
ACTB-206ENST00000443528 ABHD16BQ9H3Z7 469 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 COL20A1Q9P218 1284 aa18.22■□□□□ 0.51
ACTB-206ENST00000443528 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
ACTB-206ENST00000443528 CDC27P30260 824 aa18.21■□□□□ 0.51
ACTB-206ENST00000443528 RCAN1P53805 252 aa18.21■□□□□ 0.51
ACTB-206ENST00000443528 GHRHRQ02643 423 aa18.21■□□□□ 0.51
ACTB-206ENST00000443528 TOB2Q14106 344 aaPredicted RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 RTN1Q16799 776 aa18.21■□□□□ 0.51
ACTB-206ENST00000443528 SYTL5Q8TDW5 730 aaPredicted RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 PAWRQ96IZ0 340 aaKnown RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 UPF3BQ9BZI7 483 aaKnown RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 RBM28Q9NW13 759 aaKnown RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 ADD3Q9UEY8 706 aaKnown RBP18.21■□□□□ 0.51
ACTB-206ENST00000443528 CYP46A1Q9Y6A2 500 aa18.21■□□□□ 0.51
ACTB-206ENST00000443528 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
ACTB-206ENST00000443528 GOLGA8AA7E2F4 631 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 CFBP00751 764 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 AKR1A1P14550 325 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 HSD17B4P51659 736 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 FUT2Q10981 343 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 DNERQ8NFT8 737 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 LENG1Q96BZ8 264 aaPredicted RBP18.2■□□□□ 0.5
ACTB-206ENST00000443528 TAAR1Q96RJ0 339 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
ACTB-206ENST00000443528 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 LOC102724159A0A0B4J2E5 919 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 ADCY6O43306 1168 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
ACTB-206ENST00000443528 EDNRBP24530 442 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 EVCP57679 992 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 ANAPC15P60006 121 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 TRAF1Q13077 416 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 PWP2Q15269 919 aaKnown RBP18.19■□□□□ 0.5
ACTB-206ENST00000443528 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 NAP1L2Q9ULW6 460 aaPredicted RBP18.19■□□□□ 0.5
ACTB-206ENST00000443528 MYH6P13533 1939 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 CNTNAP5Q8WYK1 1306 aa18.19■□□□□ 0.5
ACTB-206ENST00000443528 RARBP10826 455 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 COL6A1P12109 1028 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
ACTB-206ENST00000443528 METAP2P50579 478 aaKnown RBP eCLIP18.18■□□□□ 0.51e-17■□□□□ 9.8
ACTB-206ENST00000443528 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 EEPD1Q7L9B9 569 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
ACTB-206ENST00000443528 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 PDGFCQ9NRA1 345 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
ACTB-206ENST00000443528 MCM3APO60318 1980 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 LRRC37A2A6NM11 1700 aa18.18■□□□□ 0.5
ACTB-206ENST00000443528 NID2Q14112 1375 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.17■□□□□ 0.5
ACTB-206ENST00000443528 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
ACTB-206ENST00000443528 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
ACTB-206ENST00000443528 PPP2R5BQ15173 497 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 LRRC41Q15345 812 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 GJC2Q5T442 439 aaPredicted RBP18.17■□□□□ 0.5
ACTB-206ENST00000443528 C11orf49Q9H6J7 331 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 XPNPEP3Q9NQH7 507 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
ACTB-206ENST00000443528 MAP3K20Q9NYL2 800 aaKnown RBP18.17■□□□□ 0.5
ACTB-206ENST00000443528 DNM1LO00429 736 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 PGK1P00558 417 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 ADCYAP1R1P41586 468 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 ARRDC4Q8NCT1 418 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 NSUN6Q8TEA1 469 aaKnown RBP18.16■□□□□ 0.5
ACTB-206ENST00000443528 RMDN3Q96TC7 470 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 LARP6Q9BRS8 491 aaKnown RBP18.16■□□□□ 0.5
ACTB-206ENST00000443528 VTA1Q9NP79 307 aa18.16■□□□□ 0.5
ACTB-206ENST00000443528 GCOM1H8Y6P7 765 aaPredicted RBP18.15■□□□□ 0.5
ACTB-206ENST00000443528 ADAMTS4O75173 837 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 DUSP11O75319 330 aaKnown RBP18.15■□□□□ 0.5
ACTB-206ENST00000443528 POLR2MP0CAP2 368 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
ACTB-206ENST00000443528 PDE4DQ08499 809 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 TMEM63BQ5T3F8 832 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 PXMP2Q9NR77 195 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 V9GY48 417 aaPredicted RBP18.15■□□□□ 0.5
ACTB-206ENST00000443528 SYNRGQ9UMZ2 1314 aa18.15■□□□□ 0.5
ACTB-206ENST00000443528 CCDC196A0A1B0GTZ2 297 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
ACTB-206ENST00000443528 SMPD1P17405 629 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 EIF2AK2P19525 551 aaKnown RBP18.14■□□□□ 0.49
ACTB-206ENST00000443528 PTGS1P23219 599 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 TNFAIP2Q03169 654 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 NTRK3Q16288 839 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms