RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ALX1Q15699 326 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 ARHGEF16Q5VV41 709 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 TBC1D9BQ66K14 1250 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 AGTPBP1Q9UPW5 1226 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 ODR4Q5SWX8 454 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 TEKT3Q9BXF9 490 aa24.7■■□□□ 1.54
CTDSPL-206ENST00000443503 GCFC2P16383 781 aaKnown RBP24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 NR2F2P24468 414 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 CASP1P29466 404 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 LRCH2Q5VUJ6 765 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 DCUN1D2Q6PH85 259 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 CCDC127Q96BQ5 260 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 HINFPQ9BQA5 517 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 IVNS1ABPQ9Y6Y0 642 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 ENC1O14682 589 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 IRX3P78415 501 aaPredicted RBP24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 UBE2SQ16763 222 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 FBF1Q8TES7 1133 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 GLG1Q92896 1179 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 KIDINS220Q9ULH0 1771 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 OTUD6AQ7L8S5 288 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 KRT27Q7Z3Y8 459 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 CDC23Q9UJX2 597 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 AMFRQ9UKV5 643 aa24.69■■□□□ 1.54
CTDSPL-206ENST00000443503 TCP1P17987 556 aaKnown RBP24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 FKBP3Q00688 224 aaKnown RBP24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 TSNARE1Q96NA8 513 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 WDR19Q8NEZ3 1342 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 H2AFZP0C0S5 128 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 ZBTB16Q05516 673 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 H2AFVQ71UI9 128 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 C10orf67Q8IYJ2 551 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 EXOC3L4Q17RC7 722 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 CCDC105Q8IYK2 499 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 ALDH8A1Q9H2A2 487 aaPredicted RBP24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 SORBS3O60504 671 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 GNPTABQ3T906 1256 aa24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 ARL6IP4Q66PJ3 421 aaKnown RBP24.68■■□□□ 1.54
CTDSPL-206ENST00000443503 STK17AQ9UEE5 414 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 COMMD10Q9Y6G5 202 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 ZNF609O15014 1411 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 BMP3P12645 472 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 ZNF354CQ86Y25 554 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 STK36Q9NRP7 1315 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 CCNE1P24864 410 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 MAK16Q9BXY0 300 aaKnown RBP24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 UBN2Q6ZU65 1347 aa24.67■■□□□ 1.54
CTDSPL-206ENST00000443503 EXOSC10Q01780 885 aaKnown RBP24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 TMEM47Q9BQJ4 181 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 RWDD2AQ9UIY3 292 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 ACRBPQ8NEB7 543 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 DEPTORQ8TB45 409 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 PI4KBQ9UBF8 816 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 TAF6LQ9Y6J9 622 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 NRXN1Q9ULB1 1477 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 SOWAHDA6NJG2 315 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 GDAQ9Y2T3 454 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 RAD17O75943 681 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 KRT26Q7Z3Y9 468 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 CCDC63Q8NA47 563 aa24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 DHX36Q9H2U1 1008 aaKnown RBP24.66■■□□□ 1.54
CTDSPL-206ENST00000443503 MEIS1O00470 390 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 VIMP08670 466 aaKnown RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 KRT19P08727 400 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 MMP10P09238 476 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 CACNB3P54284 484 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 PPM1KQ8N3J5 372 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 GOLGA5Q8TBA6 731 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 SMCR8Q8TEV9 937 aaPredicted RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 MRRFQ96E11 262 aaKnown RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 PAGR1Q9BTK6 254 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 CD209Q9NNX6 404 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 DISC1Q9NRI5 854 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 SAMD15Q9P1V8 674 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 MYL1P05976 194 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 GUCY2FP51841 1108 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 ARMCX5Q6P1M9 558 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 SARM1Q6SZW1 724 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 hCG_1984214I3L0E3 225 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 ATP2A2P16615 1042 aaKnown RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 RASSF7Q02833 373 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 MAN2A1Q16706 1144 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 DCAF15Q66K64 600 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 ZNF713Q8N859 430 aaPredicted RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 PDLIM2Q96JY6 352 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 PPFIA1Q13136 1202 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 PDIA6Q15084 440 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 RUFY4Q6ZNE9 571 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 SGMS1Q86VZ5 419 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 MCF2L2Q86YR7 1114 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 FAM84BQ96KN1 310 aaPredicted RBP24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 COA1Q9GZY4 146 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 NKIRAS1Q9NYS0 192 aa24.65■■□□□ 1.54
CTDSPL-206ENST00000443503 LONRF2Q1L5Z9 754 aa24.64■■□□□ 1.54
CTDSPL-206ENST00000443503 KMT5BQ4FZB7 885 aa24.64■■□□□ 1.54
CTDSPL-206ENST00000443503 CEMIPQ8WUJ3 1361 aa24.64■■□□□ 1.54
CTDSPL-206ENST00000443503 IQGAP1P46940 1657 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms