RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PTPDC1A2A3K4 754 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 ITGA7Q13683 1181 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 KIAA1211Q6ZU35 1233 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 MAFAQ8NHW3 353 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-204ENST00000438571 AP5M1Q9H0R1 490 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 VTA1Q9NP79 307 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 TET1Q8NFU7 2136 aa21.38■■□□□ 1.01
GTF3A-204ENST00000438571 TLR3O15455 904 aaKnown RBP21.37■■□□□ 1.01
GTF3A-204ENST00000438571 SNHG28P0DPA3 235 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 CALML3P27482 149 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 PBX2P40425 430 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 PPIGQ13427 754 aaKnown RBP eCLIP21.37■■□□□ 1.01
GTF3A-204ENST00000438571 GRIN2CQ14957 1233 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 IQSEC1Q6DN90 963 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 MFSD6Q6ZSS7 791 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 CHD1LQ86WJ1 897 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
GTF3A-204ENST00000438571 BAZ2BQ9UIF8 2168 aaKnown RBP21.36■■□□□ 1.01
GTF3A-204ENST00000438571 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.36■■□□□ 1.01
GTF3A-204ENST00000438571 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.36■■□□□ 1.01
GTF3A-204ENST00000438571 B4GALT4O60513 344 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 FOSL2P15408 326 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 RASIP1Q5U651 963 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 ZNF365Q70YC5 407 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 PPP1R13LQ8WUF5 828 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 TRPV6Q9H1D0 765 aa21.36■■□□□ 1.01
GTF3A-204ENST00000438571 NUCB1Q02818 461 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 DUSP28Q4G0W2 176 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 CWC27Q6UX04 472 aaKnown RBP21.35■■□□□ 1.01
GTF3A-204ENST00000438571 TMEM199Q8N511 208 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 UBA5Q9GZZ9 404 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 IL25Q9H293 177 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 OSBPL3Q9H4L5 887 aa21.35■■□□□ 1.01
GTF3A-204ENST00000438571 SPTBN5Q9NRC6 3674 aaKnown RBP21.34■■□□□ 1.01
GTF3A-204ENST00000438571 TMEM265A0A087WTH1 108 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 CCL23P55773 120 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 RPS6P62753 249 aaKnown RBP21.34■■□□□ 1.01
GTF3A-204ENST00000438571 USH1GQ495M9 461 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 RNF207Q6ZRF8 634 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 COPS5Q92905 334 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 PBX4Q9BYU1 374 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 WNT8AQ9H1J5 351 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 HIPK3Q9H422 1215 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 RWDD1Q9H446 243 aaPredicted RBP21.34■■□□□ 1.01
GTF3A-204ENST00000438571 CXXC1Q9P0U4 656 aaPredicted RBP21.34■■□□□ 1.01
GTF3A-204ENST00000438571 Q9Y3F1 56 aa21.34■■□□□ 1.01
GTF3A-204ENST00000438571 WDR19Q8NEZ3 1342 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 DOCK5Q9H7D0 1870 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 RBM47A0AV96 593 aaKnown RBP21.33■■□□□ 1.01
GTF3A-204ENST00000438571 CABYRO75952 493 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 USP38Q8NB14 1042 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 TIFAQ96CG3 184 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 TTC14Q96N46 770 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 NOC4LQ9BVI4 516 aaKnown RBP21.33■■□□□ 1.01
GTF3A-204ENST00000438571 WDR11Q9BZH6 1224 aa21.33■■□□□ 1.01
GTF3A-204ENST00000438571 ADD3Q9UEY8 706 aaKnown RBP21.33■■□□□ 1.01
GTF3A-204ENST00000438571 B4E1Z4 1266 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 ZNF213O14771 459 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 KDM4AO75164 1064 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 PCP11498 1178 aaKnown RBP21.32■■□□□ 1
GTF3A-204ENST00000438571 PSRC1Q6PGN9 363 aaPredicted RBP21.32■■□□□ 1
GTF3A-204ENST00000438571 OR6J1Q8NGC5 347 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 TBC1D5Q92609 795 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 ESR2Q92731 530 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 VWCEQ96DN2 955 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 RNF41Q9H4P4 317 aaPredicted RBP21.32■■□□□ 1
GTF3A-204ENST00000438571 ZNF576Q9H609 170 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 IL23AQ9NPF7 189 aa21.32■■□□□ 1
GTF3A-204ENST00000438571 ZEB2O60315 1214 aa21.31■■□□□ 1
GTF3A-204ENST00000438571 EDNRBP24530 442 aa21.31■■□□□ 1
GTF3A-204ENST00000438571 PURAQ00577 322 aaKnown RBP21.31■■□□□ 1
GTF3A-204ENST00000438571 PNMA1Q8ND90 353 aa21.31■■□□□ 1
GTF3A-204ENST00000438571 SCLYQ96I15 445 aa21.31■■□□□ 1
GTF3A-204ENST00000438571 ALDH8A1Q9H2A2 487 aaPredicted RBP21.31■■□□□ 1
GTF3A-204ENST00000438571 DIAPH3Q9NSV4 1193 aa21.31■■□□□ 1
GTF3A-204ENST00000438571 TRMT13Q9NUP7 481 aaKnown RBP21.31■■□□□ 1
GTF3A-204ENST00000438571 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
GTF3A-204ENST00000438571 ARIH2O95376 493 aa21.3■■□□□ 1
GTF3A-204ENST00000438571 MYL3P08590 195 aa21.3■■□□□ 1
GTF3A-204ENST00000438571 CYP2C9P11712 490 aa21.3■■□□□ 1
GTF3A-204ENST00000438571 CDC37Q16543 378 aaPredicted RBP21.3■■□□□ 1
GTF3A-204ENST00000438571 RBAK-RBAKDNI3L0D1 243 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 MFAP1P55081 439 aaKnown RBP21.29■■□□□ 1
GTF3A-204ENST00000438571 PDE4DQ08499 809 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 GPATCH4Q5T3I0 446 aaKnown RBP21.29■■□□□ 1
GTF3A-204ENST00000438571 OTOP2Q7RTS6 562 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 DGKHQ86XP1 1220 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 ENAHQ8N8S7 591 aaPredicted RBP21.29■■□□□ 1
GTF3A-204ENST00000438571 HERVK_113Q902F9 699 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 COL20A1Q9P218 1284 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 TNKSO95271 1327 aa21.29■■□□□ 1
GTF3A-204ENST00000438571 CHD7Q9P2D1 2997 aa21.28■■□□□ 1
GTF3A-204ENST00000438571 LOC102724159A0A0B4J2E5 919 aa21.28■■□□□ 1
GTF3A-204ENST00000438571 AAMPQ13685 434 aa21.28■■□□□ 1
GTF3A-204ENST00000438571 PPP2R5BQ15173 497 aa21.28■■□□□ 1
GTF3A-204ENST00000438571 PWP2Q15269 919 aaKnown RBP21.28■■□□□ 1
GTF3A-204ENST00000438571 ADGRF4Q8IZF3 695 aa21.28■■□□□ 1
GTF3A-204ENST00000438571 YBX2Q9Y2T7 364 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms