RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 RIPK3Q9Y572 518 aa26.28■■□□□ 1.8
CPSF4-204ENST00000436336 MUM1L1Q5H9M0 696 aa26.27■■□□□ 1.8
CPSF4-204ENST00000436336 SPATA32Q96LK8 384 aa26.27■■□□□ 1.8
CPSF4-204ENST00000436336 HOMER2Q9NSB8 354 aa26.27■■□□□ 1.8
CPSF4-204ENST00000436336 CLIC4Q9Y696 253 aa26.27■■□□□ 1.8
CPSF4-204ENST00000436336 NFIBO00712 420 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 YEATS4O95619 227 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 APLP1P51693 650 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 INF2Q27J81 1249 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 RIOX2Q8IUF8 465 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 LEO1Q8WVC0 666 aaPredicted RBP26.26■■□□□ 1.79
CPSF4-204ENST00000436336 TBC1D5Q92609 795 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 SPATC1LQ9H0A9 340 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 ZCCHC17Q9NP64 241 aaKnown RBP26.26■■□□□ 1.79
CPSF4-204ENST00000436336 CREBZFQ9NS37 354 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 RCOR1Q9UKL0 485 aa26.26■■□□□ 1.79
CPSF4-204ENST00000436336 SPDYE3A6NKU9 549 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 CNMDO75829 334 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 CYP2C8P10632 490 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 HSD17B4P51659 736 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 SF3A1Q15459 793 aaKnown RBP26.25■■□□□ 1.79
CPSF4-204ENST00000436336 TTC38Q5R3I4 469 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 TBCKQ8TEA7 893 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 SMCR8Q8TEV9 937 aaPredicted RBP26.25■■□□□ 1.79
CPSF4-204ENST00000436336 PGBD1Q96JS3 809 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 PAGR1Q9BTK6 254 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 ANO3Q9BYT9 981 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 MAF1Q9H063 256 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 RBPJLQ9UBG7 517 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 ELP1O95163 1332 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 ATP2B1P20020 1258 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 HOXA13P31271 388 aaPredicted RBP26.25■■□□□ 1.79
CPSF4-204ENST00000436336 NEK8Q86SG6 692 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 CHST13Q8NET6 341 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 PARK7Q99497 189 aaKnown RBP26.25■■□□□ 1.79
CPSF4-204ENST00000436336 PCDHB6Q9Y5E3 794 aa26.25■■□□□ 1.79
CPSF4-204ENST00000436336 PTMSP20962 102 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 NBR1Q14596 966 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 STK38Q15208 465 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 LINC00301Q8NCQ3 95 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 ACAD9Q9H845 621 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.24■■□□□ 1.79
CPSF4-204ENST00000436336 CEP131Q9UPN4 1083 aa26.24■■□□□ 1.79
CPSF4-204ENST00000436336 PRPF40AO75400 957 aaKnown RBP26.23■■□□□ 1.79
CPSF4-204ENST00000436336 GCLCP48506 637 aaPredicted RBP26.23■■□□□ 1.79
CPSF4-204ENST00000436336 SREBF2Q12772 1141 aa26.23■■□□□ 1.79
CPSF4-204ENST00000436336 TXNRD2Q9NNW7 524 aa26.23■■□□□ 1.79
CPSF4-204ENST00000436336 RASSF10A6NK89 507 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 COPB2P35606 906 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 SLC39A14Q15043 492 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 PAXIP1Q6ZW49 1069 aaPredicted RBP26.22■■□□□ 1.79
CPSF4-204ENST00000436336 LMBRD1Q9NUN5 540 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 FBXO40Q9UH90 709 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 IGF2BP3O00425 579 aaKnown RBP eCLIP26.22■■□□□ 1.79
CPSF4-204ENST00000436336 PEX10O60683 326 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 SLC25A27O95847 323 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 BMP15O95972 392 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 PTPAQ15257 358 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 RNF207Q6ZRF8 634 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 KCNG4Q8TDN1 519 aa26.22■■□□□ 1.79
CPSF4-204ENST00000436336 WNT7AO00755 349 aa26.21■■□□□ 1.79
CPSF4-204ENST00000436336 DEFB115Q30KQ5 88 aa26.21■■□□□ 1.79
CPSF4-204ENST00000436336 CYP4F22Q6NT55 531 aa26.21■■□□□ 1.79
CPSF4-204ENST00000436336 FCHSD1Q86WN1 690 aa26.21■■□□□ 1.79
CPSF4-204ENST00000436336 MOV10L1Q9BXT6 1211 aaKnown RBP26.21■■□□□ 1.79
CPSF4-204ENST00000436336 EHMT1Q9H9B1 1298 aa26.21■■□□□ 1.79
CPSF4-204ENST00000436336 SPTLC2O15270 562 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 RPS6P62753 249 aaKnown RBP26.2■■□□□ 1.79
CPSF4-204ENST00000436336 ERVK-9P63128 1117 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 ERVK-24P63145 666 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 ORC2Q13416 577 aaPredicted RBP26.2■■□□□ 1.79
CPSF4-204ENST00000436336 LETM2Q2VYF4 491 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 NSMFQ6X4W1 530 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 IFNL1Q8IU54 200 aa26.2■■□□□ 1.79
CPSF4-204ENST00000436336 LCTP09848 1927 aa26.2■■□□□ 1.78
CPSF4-204ENST00000436336 SREBF1P36956 1147 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 ZNF174Q15697 407 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 Q3C1V9 767 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 NAP1L4Q99733 375 aaKnown RBP26.19■■□□□ 1.78
CPSF4-204ENST00000436336 MORC2Q9Y6X9 1032 aaPredicted RBP26.19■■□□□ 1.78
CPSF4-204ENST00000436336 ZNFX1Q9P2E3 1918 aaKnown RBP26.19■■□□□ 1.78
CPSF4-204ENST00000436336 PPP6R2O75170 966 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 TM4SF4P48230 202 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 USP11P51784 963 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 NCAPG2Q86XI2 1143 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 GPRC5AQ8NFJ5 357 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 SYTL5Q8TDW5 730 aaPredicted RBP26.19■■□□□ 1.78
CPSF4-204ENST00000436336 CRYGNQ8WXF5 182 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 MORF4L1Q9UBU8 362 aa26.19■■□□□ 1.78
CPSF4-204ENST00000436336 CCNT1O60563 726 aaKnown RBP26.18■■□□□ 1.78
CPSF4-204ENST00000436336 MCM7P33993 719 aa26.18■■□□□ 1.78
CPSF4-204ENST00000436336 NOGQ13253 232 aa26.18■■□□□ 1.78
CPSF4-204ENST00000436336 SLC30A10Q6XR72 485 aa26.18■■□□□ 1.78
CPSF4-204ENST00000436336 JMYQ8N9B5 988 aa26.18■■□□□ 1.78
CPSF4-204ENST00000436336 SHCBP1Q8NEM2 672 aa26.18■■□□□ 1.78
CPSF4-204ENST00000436336 EDIL3O43854 480 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 ERCC3P19447 782 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 CCNA1P78396 465 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 ARHGAP4P98171 946 aa26.17■■□□□ 1.78
CPSF4-204ENST00000436336 GRM1Q13255 1194 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms