RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
CD44-210ENST00000434472 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
CD44-210ENST00000434472 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
CD44-210ENST00000434472 KIF20AO95235 890 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 TTLL1O95922 423 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 TUBBP07437 444 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 PNMA6AP0CW24 399 aaPredicted RBP11.66□□□□□ -0.54
CD44-210ENST00000434472 CYLC1P35663 651 aaPredicted RBP11.66□□□□□ -0.54
CD44-210ENST00000434472 TECP42680 631 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 CHMP4BP1P59074 171 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 PSMD2Q13200 908 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 BRD3Q15059 726 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 FIGNQ5HY92 759 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 GPATCH4Q5T3I0 446 aaKnown RBP11.66□□□□□ -0.54
CD44-210ENST00000434472 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 EHBP1Q8NDI1 1231 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 ACRBPQ8NEB7 543 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 TRPC5Q9UL62 973 aaPredicted RBP11.66□□□□□ -0.54
CD44-210ENST00000434472 ATP6V0A2Q9Y487 856 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 FHOD1Q9Y613 1164 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 FOCADQ5VW36 1801 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 ABCB11O95342 1321 aa11.66□□□□□ -0.54
CD44-210ENST00000434472 A0A1W2PQJ5 194 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 TTC26A0AVF1 554 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 PES1O00541 588 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 NDUFA10O95299 355 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 HLA-DOAP06340 250 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 TXKP42681 527 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 PMS1P54277 932 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 ZBED6P86452 979 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 MEA1Q16626 185 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 PPP4R3AQ6IN85 833 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 SLC35F6Q8N357 371 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 CNOT6LQ96LI5 555 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 TMX4Q9H1E5 349 aaPredicted RBP11.65□□□□□ -0.54
CD44-210ENST00000434472 CPVLQ9H3G5 476 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 ARFGAP3Q9NP61 516 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 RIC8AQ9NPQ8 531 aa11.65□□□□□ -0.54
CD44-210ENST00000434472 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.55
CD44-210ENST00000434472 AKR1B1P15121 316 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 ARHGAP25P42331 645 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CDK17Q00537 523 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 DDR1Q08345 913 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 ZNF543Q08ER8 600 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 TBC1D8BQ0IIM8 1120 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 GRB10Q13322 594 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 PICALMQ13492 652 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 KRT79Q5XKE5 535 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 ANKRD40Q6AI12 368 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 HHIPL2Q6UWX4 724 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 ERGIC2Q96RQ1 377 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 SLF1Q9BQI6 1058 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 TMEM260Q9NX78 707 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 SERPINB13Q9UIV8 391 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 FRMPD2Q68DX3 1309 aaPredicted RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CTAGE15A4D2H0 777 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 B4DLN1 442 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 ERLIN1O75477 346 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 IPO7O95373 1038 aaKnown RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 CTAGE8P0CG41 777 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 STK4Q13043 487 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 MCTP2Q6DN12 878 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CENPPQ6IPU0 288 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CTAGE6Q86UF2 777 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 ZSCAN29Q8IWY8 852 aaPredicted RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 CTAGE4Q8IX94 777 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 GUF1Q8N442 669 aaKnown RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 LRRC15Q8TF66 581 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 LARP4BQ92615 738 aaKnown RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 RAD54LQ92698 747 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 CUL5Q93034 780 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 COA7Q96BR5 231 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 IRX2Q9BZI1 471 aaPredicted RBP11.64□□□□□ -0.55
CD44-210ENST00000434472 GBP3Q9H0R5 595 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 EHD4Q9H223 541 aa11.64□□□□□ -0.55
CD44-210ENST00000434472 PRDM4Q9UKN5 801 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms