RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 USH1GQ495M9 461 aa26.62■■□□□ 1.85
HOMER3-203ENST00000433218 FAM109BQ6ICB4 259 aaPredicted RBP26.62■■□□□ 1.85
HOMER3-203ENST00000433218 VTI1AQ96AJ9 217 aa26.62■■□□□ 1.85
HOMER3-203ENST00000433218 RNPC3Q96LT9 517 aaKnown RBP26.62■■□□□ 1.85
HOMER3-203ENST00000433218 PPP1R12CQ9BZL4 782 aa26.62■■□□□ 1.85
HOMER3-203ENST00000433218 TTYH1Q9H313 450 aaPredicted RBP26.62■■□□□ 1.85
HOMER3-203ENST00000433218 SPC25Q9HBM1 224 aa26.62■■□□□ 1.85
HOMER3-203ENST00000433218 DCDC2CA8MYV0 355 aa26.61■■□□□ 1.85
HOMER3-203ENST00000433218 ARVCFO00192 962 aa26.61■■□□□ 1.85
HOMER3-203ENST00000433218 DYNC1LI2O43237 492 aaPredicted RBP26.61■■□□□ 1.85
HOMER3-203ENST00000433218 PCP11498 1178 aaKnown RBP26.61■■□□□ 1.85
HOMER3-203ENST00000433218 MFAP1P55081 439 aaKnown RBP26.61■■□□□ 1.85
HOMER3-203ENST00000433218 PSMC6P62333 389 aa26.61■■□□□ 1.85
HOMER3-203ENST00000433218 ENAHQ8N8S7 591 aaPredicted RBP26.61■■□□□ 1.85
HOMER3-203ENST00000433218 PNMA1Q8ND90 353 aa26.61■■□□□ 1.85
HOMER3-203ENST00000433218 SLC17A8Q8NDX2 589 aa26.61■■□□□ 1.85
HOMER3-203ENST00000433218 RNF41Q9H4P4 317 aaPredicted RBP26.61■■□□□ 1.85
HOMER3-203ENST00000433218 PPP1R13LQ8WUF5 828 aa26.6■■□□□ 1.85
HOMER3-203ENST00000433218 TTC14Q96N46 770 aa26.6■■□□□ 1.85
HOMER3-203ENST00000433218 DSCC1Q9BVC3 393 aa26.6■■□□□ 1.85
HOMER3-203ENST00000433218 DOCK5Q9H7D0 1870 aa26.6■■□□□ 1.85
HOMER3-203ENST00000433218 TRIP12Q14669 1992 aaPredicted RBP26.6■■□□□ 1.85
HOMER3-203ENST00000433218 TNKSO95271 1327 aa26.6■■□□□ 1.85
HOMER3-203ENST00000433218 TIMP1P01033 207 aa26.59■■□□□ 1.85
HOMER3-203ENST00000433218 RPS6P62753 249 aaKnown RBP26.59■■□□□ 1.85
HOMER3-203ENST00000433218 TTC22Q5TAA0 569 aa26.59■■□□□ 1.85
HOMER3-203ENST00000433218 ZNF697Q5TEC3 545 aa26.59■■□□□ 1.85
HOMER3-203ENST00000433218 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.59■■□□□ 1.85
HOMER3-203ENST00000433218 VTA1Q9NP79 307 aa26.59■■□□□ 1.85
HOMER3-203ENST00000433218 TAF6LQ9Y6J9 622 aa26.59■■□□□ 1.85
HOMER3-203ENST00000433218 PTPRSQ13332 1948 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 KIAA1211Q6ZU35 1233 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 C16orf59Q7L2K0 433 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 TBC1D5Q92609 795 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 MROH7Q68CQ1 1323 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 WDR19Q8NEZ3 1342 aa26.58■■□□□ 1.85
HOMER3-203ENST00000433218 RBAK-RBAKDNI3L0D1 243 aa26.57■■□□□ 1.84
HOMER3-203ENST00000433218 CD4P01730 458 aa26.57■■□□□ 1.84
HOMER3-203ENST00000433218 CDC37Q16543 378 aaPredicted RBP26.57■■□□□ 1.84
HOMER3-203ENST00000433218 RNF207Q6ZRF8 634 aa26.57■■□□□ 1.84
HOMER3-203ENST00000433218 ZSWIM5Q9P217 1185 aa26.57■■□□□ 1.84
HOMER3-203ENST00000433218 TET1Q8NFU7 2136 aa26.57■■□□□ 1.84
HOMER3-203ENST00000433218 CSF2RAP15509 400 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 CYB5R4Q7L1T6 521 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 DGKHQ86XP1 1220 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 SLC43A3Q8NBI5 491 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 COPS5Q92905 334 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 ZSCAN10Q96SZ4 725 aaPredicted RBP26.56■■□□□ 1.84
HOMER3-203ENST00000433218 COL20A1Q9P218 1284 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 ACRP10323 421 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 CYP2C18P33260 490 aa26.56■■□□□ 1.84
HOMER3-203ENST00000433218 TRANK1O15050 2925 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 HIP1O00291 1037 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 ARIH2O95376 493 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 EDNRBP24530 442 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 SMAD3P84022 425 aaKnown RBP26.55■■□□□ 1.84
HOMER3-203ENST00000433218 ITGA7Q13683 1181 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 IMMTQ16891 758 aaKnown RBP26.55■■□□□ 1.84
HOMER3-203ENST00000433218 DUSP28Q4G0W2 176 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 IQSEC1Q6DN90 963 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 MFSD5Q6N075 450 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 ADGRF4Q8IZF3 695 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 AP5M1Q9H0R1 490 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 TRPV6Q9H1D0 765 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 KAT14Q9H8E8 782 aa26.55■■□□□ 1.84
HOMER3-203ENST00000433218 MUC3AQ02505 3323 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 B4GALT4O60513 344 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 PTH1RQ03431 593 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 GPATCH4Q5T3I0 446 aaKnown RBP26.54■■□□□ 1.84
HOMER3-203ENST00000433218 IQCA1Q86XH1 822 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 STAG2Q8N3U4 1231 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 ANKS1AQ92625 1134 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 CDX2Q99626 313 aaPredicted RBP26.54■■□□□ 1.84
HOMER3-203ENST00000433218 WDR11Q9BZH6 1224 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 SEMA6BQ9H3T3 888 aa26.54■■□□□ 1.84
HOMER3-203ENST00000433218 ADD3Q9UEY8 706 aaKnown RBP26.54■■□□□ 1.84
HOMER3-203ENST00000433218 SLC35G1Q2M3R5 365 aa26.53■■□□□ 1.84
HOMER3-203ENST00000433218 QRICH1Q2TAL8 776 aa26.53■■□□□ 1.84
HOMER3-203ENST00000433218 TMEM240Q5SV17 173 aa26.53■■□□□ 1.84
HOMER3-203ENST00000433218 MYLIPQ8WY64 445 aa26.53■■□□□ 1.84
HOMER3-203ENST00000433218 SENP2Q9HC62 589 aa26.53■■□□□ 1.84
HOMER3-203ENST00000433218 RBM47A0AV96 593 aaKnown RBP26.52■■□□□ 1.84
HOMER3-203ENST00000433218 GRXCR1A8MXD5 290 aa26.52■■□□□ 1.84
HOMER3-203ENST00000433218 WNT8AQ9H1J5 351 aa26.52■■□□□ 1.84
HOMER3-203ENST00000433218 SEC23AQ15436 765 aa26.51■■□□□ 1.83
HOMER3-203ENST00000433218 JMJD4Q9H9V9 463 aa26.51■■□□□ 1.83
HOMER3-203ENST00000433218 PBX2P40425 430 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 PDE4DQ08499 809 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 OR6J1Q8NGC5 347 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 VWCEQ96DN2 955 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 Q9Y3F1 56 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 XIRP2A4UGR9 3374 aa26.5■■□□□ 1.83
HOMER3-203ENST00000433218 OPLAHO14841 1288 aa26.49■■□□□ 1.83
HOMER3-203ENST00000433218 TLR3O15455 904 aaKnown RBP26.49■■□□□ 1.83
HOMER3-203ENST00000433218 PPP1R11O60927 126 aaPredicted RBP26.49■■□□□ 1.83
HOMER3-203ENST00000433218 CYP21A2P08686 494 aa26.49■■□□□ 1.83
HOMER3-203ENST00000433218 DNAJB2P25686 324 aa26.49■■□□□ 1.83
HOMER3-203ENST00000433218 PURAQ00577 322 aaKnown RBP26.49■■□□□ 1.83
HOMER3-203ENST00000433218 ASPRV1Q53RT3 343 aa26.49■■□□□ 1.83
HOMER3-203ENST00000433218 TAAR1Q96RJ0 339 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms