RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 TTC6Q86TZ1 520 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 LRRC56Q8IYG6 542 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-211ENST00000429595 DNAJB8Q8NHS0 232 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 CDK19Q9BWU1 502 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 AK5Q9Y6K8 562 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 BTAF1O14981 1849 aa8.93□□□□□ -0.98
PTPRK-211ENST00000429595 PRPF40AO75400 957 aaKnown RBP8.92□□□□□ -0.98
PTPRK-211ENST00000429595 VEGFAP15692 232 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-211ENST00000429595 RNF181Q9P0P0 153 aa8.92□□□□□ -0.98
PTPRK-211ENST00000429595 ITSN1Q15811 1721 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 KCPQ6ZWJ8 1503 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 PPIP5K1Q6PFW1 1433 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 POLR3AO14802 1390 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-211ENST00000429595 TGFB2P61812 414 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 MEI1Q5TIA1 1274 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 KCNH5Q8NCM2 988 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 FBXO15Q8NCQ5 510 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-211ENST00000429595 PIWIL2Q8TC59 973 aaKnown RBP8.91□□□□□ -0.98
PTPRK-211ENST00000429595 ACSF2Q96CM8 615 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-211ENST00000429595 CCDC120Q96HB5 630 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 DUSP15Q9H1R2 295 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-211ENST00000429595 TMEM59LQ9UK28 342 aa8.91□□□□□ -0.98
PTPRK-211ENST00000429595 C10orf71Q711Q0 1435 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 LMNB1P20700 586 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 SLC6A19Q695T7 634 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 TMPRSS7Q7RTY8 843 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 ABHD4Q8TB40 342 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 PPP1R13LQ8WUF5 828 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 DUSP9Q99956 384 aaKnown RBP8.9□□□□□ -0.98
PTPRK-211ENST00000429595 MIR1-1HGQ9H1L0 117 aa8.9□□□□□ -0.98
PTPRK-211ENST00000429595 WNK3Q9BYP7 1800 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 USP47Q96K76 1375 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 A0A0G2JLW4 131 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 HK2P52789 917 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
PTPRK-211ENST00000429595 GAB4Q2WGN9 574 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 MCATQ8IVS2 390 aaKnown RBP8.89□□□□□ -0.99
PTPRK-211ENST00000429595 ADAMTS10Q9H324 1103 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 SP110Q9HB58 689 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 TLR6Q9Y2C9 796 aa8.89□□□□□ -0.99
PTPRK-211ENST00000429595 KIAA1210Q9ULL0 1709 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
PTPRK-211ENST00000429595 HPXP02790 462 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 ETV3P41162 512 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 CREG2Q8IUH2 290 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 KRTAP4-2Q9BYR5 136 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 CORINQ9Y5Q5 1042 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 SPATA31E1Q6ZUB1 1445 aa8.88□□□□□ -0.99
PTPRK-211ENST00000429595 CICQ96RK0 1608 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-211ENST00000429595 TUBGCP6Q96RT7 1819 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 ABCC6O95255 1503 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 LOC105371045A0A1W2PR82 267 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 RPL6Q02878 288 aaKnown RBP8.87□□□□□ -0.99
PTPRK-211ENST00000429595 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 ZSCAN18Q8TBC5 510 aaPredicted RBP8.87□□□□□ -0.99
PTPRK-211ENST00000429595 MYLIPQ8WY64 445 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 EPB41L4BQ9H329 900 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 CEP131Q9UPN4 1083 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 PXDNLA1KZ92 1463 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
PTPRK-211ENST00000429595 NFIBO00712 420 aa8.86□□□□□ -0.99
PTPRK-211ENST00000429595 ZSCAN22P10073 491 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-211ENST00000429595 SRFP11831 508 aa8.86□□□□□ -0.99
PTPRK-211ENST00000429595 RAC2P15153 192 aa8.86□□□□□ -0.99
PTPRK-211ENST00000429595 TPP2P29144 1249 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-211ENST00000429595 TRHRP34981 398 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-211ENST00000429595 CD320Q9NPF0 282 aa8.86□□□□□ -0.99
PTPRK-211ENST00000429595 DCP1AQ9NPI6 582 aaPredicted RBP8.86□□□□□ -0.99
PTPRK-211ENST00000429595 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
PTPRK-211ENST00000429595 CPSF1Q10570 1443 aaKnown RBP8.86□□□□□ -0.99
PTPRK-211ENST00000429595 UPK3BL1B0FP48 263 aa8.85□□□□□ -0.99
PTPRK-211ENST00000429595 UPK3BL2E5RIL1 263 aa8.85□□□□□ -0.99
PTPRK-211ENST00000429595 NPIPB6E9PJ23 425 aa8.85□□□□□ -0.99
PTPRK-211ENST00000429595 HSPA8P11142 646 aaKnown RBP8.85□□□□□ -0.99
PTPRK-211ENST00000429595 MAP2K1Q02750 393 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-211ENST00000429595 PDE4BQ07343 736 aa8.85□□□□□ -0.99
PTPRK-211ENST00000429595 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
PTPRK-211ENST00000429595 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
PTPRK-211ENST00000429595 GLTPD2A6NH11 291 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 MMP10P09238 476 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 DPEP1P16444 411 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 DALRD3Q5D0E6 543 aaKnown RBP8.84□□□□□ -0.99
PTPRK-211ENST00000429595 SIAH1Q8IUQ4 282 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 DTWD2Q8NBA8 298 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 PHC3Q8NDX5 983 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 RNF32Q9H0A6 362 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 TNRC6CQ9HCJ0 1690 aaKnown RBP8.84□□□□□ -0.99
PTPRK-211ENST00000429595 CNTNAP1P78357 1384 aa8.84□□□□□ -0.99
PTPRK-211ENST00000429595 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
PTPRK-211ENST00000429595 MED14OSP0DP75 135 aa8.83□□□□□ -1
PTPRK-211ENST00000429595 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
PTPRK-211ENST00000429595 SMIM5Q71RC9 77 aa8.83□□□□□ -1
PTPRK-211ENST00000429595 GPR62Q9BZJ7 368 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms