RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 ADCK5Q3MIX3 580 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 RNF180Q86T96 592 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 FBXO11Q86XK2 927 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 ZNF654Q8IZM8 581 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 MTA3Q9BTC8 594 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 SZT2Q5T011 3432 aa21.07■□□□□ 0.96
SSR4P1-202ENST00000429427 BAZ2BQ9UIF8 2168 aaKnown RBP21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 A0A1W2PQ45 241 aaPredicted RBP21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 A0A1W2PQY0 241 aa21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 ZBTB5O15062 677 aa21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 CST5P28325 142 aaPredicted RBP21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 GJA9P57773 515 aa21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 CATIPQ7Z7H3 387 aa21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 SYTL5Q8TDW5 730 aaPredicted RBP21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 PIGSQ96S52 555 aa21.06■□□□□ 0.96
SSR4P1-202ENST00000429427 ACLYP53396 1101 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 NKX3-2P78367 333 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 TNFAIP2Q03169 654 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 KCNA10Q16322 511 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 TSGA10IPQ3SY00 556 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 TRIM60Q495X7 471 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 NUP133Q8WUM0 1156 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 GDF15Q99988 308 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 AMNQ9BXJ7 453 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 VTA1Q9NP79 307 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 ADD3Q9UEY8 706 aaKnown RBP21.05■□□□□ 0.96
SSR4P1-202ENST00000429427 MYH6P13533 1939 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 DDAH1O94760 285 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 C6orf222P0C671 652 aaPredicted RBP21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 RXRAP19793 462 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 LIFRP42702 1097 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 EXOSC10Q01780 885 aaKnown RBP21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 GHRHRQ02643 423 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 C1orf53Q5VUE5 145 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 HOMER1Q86YM7 354 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 RAB11FIP4Q86YS3 637 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 KCNB2Q92953 911 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 TCEANC2Q96MN5 208 aa21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 TSEN34Q9BSV6 310 aaKnown RBP21.04■□□□□ 0.96
SSR4P1-202ENST00000429427 LOC102724159A0A0B4J2E5 919 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 PLEKHA8P1O95397 391 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 MAGEA10P43363 369 aaPredicted RBP21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 BEX3Q00994 111 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 PWP2Q15269 919 aaKnown RBP21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 DNERQ8NFT8 737 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 TAAR1Q96RJ0 339 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 MAP3K14Q99558 947 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 ATP11BQ9Y2G3 1177 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 MRPL11Q9Y3B7 192 aaKnown RBP21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 PCDHA1Q9Y5I3 950 aa21.03■□□□□ 0.96
SSR4P1-202ENST00000429427 RBM47A0AV96 593 aaKnown RBP21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 HSD17B4P51659 736 aa21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 RNF20Q5VTR2 975 aa21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 TLK2Q86UE8 772 aa21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 CMTR1Q8N1G2 835 aaKnown RBP21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 NEK1Q96PY6 1258 aa21.02■□□□□ 0.96
SSR4P1-202ENST00000429427 MOXD2PA6NHM9 499 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 ASGR1P07306 291 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 IQSEC1Q6DN90 963 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 SGMS1Q86VZ5 419 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 SRBD1Q8N5C6 995 aaKnown RBP21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 PIBF1Q8WXW3 757 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 SPZ1Q9BXG8 430 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 MAF1Q9H063 256 aa21.01■□□□□ 0.95
SSR4P1-202ENST00000429427 LTBP2Q14767 1821 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 PNMA6FA0A0J9YX94 578 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 CFBP00751 764 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 CPA1P15085 419 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 HSPA4P34932 840 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 FXR1P51114 621 aaKnown RBP eCLIP21■□□□□ 0.95
SSR4P1-202ENST00000429427 TLE2Q04725 743 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 DUSP28Q4G0W2 176 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 GNASQ5JWF2 1037 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 NFXL1Q6ZNB6 911 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 NOL8Q76FK4 1167 aaKnown RBP21■□□□□ 0.95
SSR4P1-202ENST00000429427 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 MCF2L2Q86YR7 1114 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 WDR11Q9BZH6 1224 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 PDLIM7Q9NR12 457 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 BRPF3Q9ULD4 1205 aa21■□□□□ 0.95
SSR4P1-202ENST00000429427 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 DYNC1LI2O43237 492 aaPredicted RBP20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 ARIH2O95376 493 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 HOXA13P31271 388 aaPredicted RBP20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 PDE4DQ08499 809 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 FSCN1Q16658 493 aaKnown RBP20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 TMTC2Q8N394 836 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 CTCFLQ8NI51 663 aaPredicted RBP20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 RMDN3Q96TC7 470 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 STARD7Q9NQZ5 370 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 SNX14Q9Y5W7 946 aa20.99■□□□□ 0.95
SSR4P1-202ENST00000429427 TRIM43BA6NCK2 446 aa20.98■□□□□ 0.95
SSR4P1-202ENST00000429427 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
SSR4P1-202ENST00000429427 APOA5Q6Q788 366 aa20.98■□□□□ 0.95
SSR4P1-202ENST00000429427 PCSK9Q8NBP7 692 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms