RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 PPP4R3AQ6IN85 833 aa20.81■□□□□ 0.92
PDE6B-202ENST00000429163 CCDC170Q8IYT3 715 aa20.81■□□□□ 0.92
PDE6B-202ENST00000429163 PIGSQ96S52 555 aa20.81■□□□□ 0.92
PDE6B-202ENST00000429163 DUSP9Q99956 384 aaKnown RBP20.81■□□□□ 0.92
PDE6B-202ENST00000429163 CHMP4BP1P59074 171 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
PDE6B-202ENST00000429163 SV2BQ7L1I2 683 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 ERGIC2Q96RQ1 377 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 TUBGCP2Q9BSJ2 902 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 ARFGAP3Q9NP61 516 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 TTC26A0AVF1 554 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 TTLL1O95922 423 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 ARHGAP25P42331 645 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 PSMD2Q13200 908 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 MMTAG2Q9BU76 263 aaKnown RBP20.8■□□□□ 0.92
PDE6B-202ENST00000429163 TTYH3Q9C0H2 523 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
PDE6B-202ENST00000429163 TRIM49BA6NDI0 452 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 GCFC2P16383 781 aaKnown RBP20.79■□□□□ 0.92
PDE6B-202ENST00000429163 PMS1P54277 932 aaKnown RBP20.79■□□□□ 0.92
PDE6B-202ENST00000429163 ASIC1P78348 528 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 TERF2Q15554 542 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 CALCRLQ16602 461 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 KIF4BQ2VIQ3 1234 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 CENPPQ6IPU0 288 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 CC2D1AQ6P1N0 951 aaPredicted RBP20.79■□□□□ 0.92
PDE6B-202ENST00000429163 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 UNC13DQ70J99 1090 aa20.79■□□□□ 0.92
PDE6B-202ENST00000429163 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
PDE6B-202ENST00000429163 ZNHIT6Q9NWK9 470 aaKnown RBP20.79■□□□□ 0.92
PDE6B-202ENST00000429163 PNMA6FA0A0J9YX94 578 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 USP17L5A8MUK1 530 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 ZBED6P86452 979 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 MSANTD4Q8NCY6 345 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 RIC8AQ9NPQ8 531 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 MAPK8IP1Q9UQF2 711 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 CYLC1P35663 651 aaPredicted RBP20.78■□□□□ 0.92
PDE6B-202ENST00000429163 TEX35Q5T0J7 233 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 RAB21Q9UL25 225 aa20.78■□□□□ 0.92
PDE6B-202ENST00000429163 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.92
PDE6B-202ENST00000429163 PSMD14O00487 310 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 TECP42680 631 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 HHIPL2Q6UWX4 724 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 SLC35F6Q8N357 371 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 GUF1Q8N442 669 aaKnown RBP20.77■□□□□ 0.92
PDE6B-202ENST00000429163 ACRBPQ8NEB7 543 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 LRRC15Q8TF66 581 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 CCDC17Q96LX7 622 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 UBXN6Q9BZV1 441 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 EHD4Q9H223 541 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 LRWD1Q9UFC0 647 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 SERPINB13Q9UIV8 391 aa20.77■□□□□ 0.92
PDE6B-202ENST00000429163 C6orf229H3BNL8 230 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 RNF225M0QZC1 329 aaPredicted RBP20.77■□□□□ 0.91
PDE6B-202ENST00000429163 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.91
PDE6B-202ENST00000429163 LRRC63Q05C16 580 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 ZNF543Q08ER8 600 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 FKBP15Q5T1M5 1219 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 MRIQ9BWK5 157 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 PARD6BQ9BYG5 372 aa20.77■□□□□ 0.91
PDE6B-202ENST00000429163 IRX2Q9BZI1 471 aaPredicted RBP20.77■□□□□ 0.91
PDE6B-202ENST00000429163 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
PDE6B-202ENST00000429163 HNRNPH3P31942 346 aaKnown RBP20.76■□□□□ 0.91
PDE6B-202ENST00000429163 CLK2P49760 499 aaKnown RBP20.76■□□□□ 0.91
PDE6B-202ENST00000429163 TBC1D8BQ0IIM8 1120 aa20.76■□□□□ 0.91
PDE6B-202ENST00000429163 MCTP2Q6DN12 878 aa20.76■□□□□ 0.91
PDE6B-202ENST00000429163 MTMR8Q96EF0 704 aa20.76■□□□□ 0.91
PDE6B-202ENST00000429163 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
PDE6B-202ENST00000429163 TRPC5Q9UL62 973 aaPredicted RBP20.76■□□□□ 0.91
PDE6B-202ENST00000429163 EIF3CLB5ME19 914 aaKnown RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 MRPL12P52815 198 aaKnown RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 STK4Q13043 487 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 GRB10Q13322 594 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 ANKRD40Q6AI12 368 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 LARP4BQ92615 738 aaKnown RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 CDK5RAP3Q96JB5 506 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 RPGRIP1Q96KN7 1286 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 EIF3CQ99613 913 aaKnown RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 GBP3Q9H0R5 595 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 BIN2Q9UBW5 565 aaPredicted RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 MTMR7Q9Y216 660 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 IPO7O95373 1038 aaKnown RBP20.75■□□□□ 0.91
PDE6B-202ENST00000429163 GTF2IP78347 998 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 KRT79Q5XKE5 535 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 EDEM3Q9BZQ6 932 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 BLOC1S4Q9NUP1 217 aa20.75■□□□□ 0.91
PDE6B-202ENST00000429163 KRT86O43790 486 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 COBLO75128 1261 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 ERLIN1O75477 346 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 HLA-DOAP06340 250 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 TRIM21P19474 475 aaKnown RBP20.74■□□□□ 0.91
PDE6B-202ENST00000429163 PLA2G4AP47712 749 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 AMPD2Q01433 879 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 TMEM119Q4V9L6 283 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 HYIQ5T013 277 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 WDR59Q6PJI9 974 aa20.74■□□□□ 0.91
PDE6B-202ENST00000429163 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
PDE6B-202ENST00000429163 PROM2Q8N271 834 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms