RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZC3H14Q6PJT7 736 aaKnown RBP7.91□□□□□ -1.14
HMGB3P5-201ENST00000428894 KCNH1O95259 989 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 CYBBP04839 570 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 NAT2P11245 290 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 NCKAP1LP55160 1127 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 TCERG1LQ5VWI1 586 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 PAQR3Q6TCH7 311 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 CPNE8Q86YQ8 564 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 BVESQ8NE79 360 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 PPP1R14AQ96A00 147 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 EMC9Q9Y3B6 208 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 PCDHA5Q9Y5H7 936 aa7.9□□□□□ -1.14
HMGB3P5-201ENST00000428894 BAZ1BQ9UIG0 1483 aaKnown RBP7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 SRGAP3O43295 1099 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 PAMP19021 973 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 ZNF143P52747 638 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 TMEM151BQ8IW70 566 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 ACTR10Q9NZ32 417 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
HMGB3P5-201ENST00000428894 F8W031 263 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 ZNF200P98182 395 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 TNNI3KQ59H18 835 aa7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 LARP1BQ659C4 914 aaKnown RBP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 TMEFF1Q8IYR6 380 aa7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 CRACR2BQ8N4Y2 399 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 DBR1Q9UK59 544 aaKnown RBP7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 RWDD3Q9Y3V2 267 aa7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 HCFC2Q9Y5Z7 792 aa7.88□□□□□ -1.15
HMGB3P5-201ENST00000428894 NPHP3-ACAD11A0A0J9YXS1 232 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 ZC3H12DA2A288 527 aaKnown RBP7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 BUB1BO60566 1050 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 ETFBP38117 255 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 RBM25P49756 843 aaKnown RBP7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 LCE1DQ5T752 114 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 CNKSR3Q6P9H4 555 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 C6orf15Q6UXA7 325 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 FAM178BQ8IXR5 827 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 LZTR1Q8N653 840 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 DACT3Q96B18 629 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 LGR4Q9BXB1 951 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 PRKAG3Q9UGI9 489 aa7.87□□□□□ -1.15
HMGB3P5-201ENST00000428894 KIF21AQ7Z4S6 1674 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 IRS2Q9Y4H2 1338 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 TRBV23OR9-2A0A075B6M9 112 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 PPP1R11O60927 126 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 BMP7P18075 431 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 AFF3P51826 1226 aaKnown RBP7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 PRR5P85299 388 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 SCRN1Q12765 414 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 LCE4AQ5TA78 99 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 GPRC5CQ9NQ84 441 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 CLEC1BQ9P126 229 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
HMGB3P5-201ENST00000428894 DDAH1O94760 285 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 INHBBP09529 407 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 GLI4P10075 376 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 PFKLP17858 780 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 ARID5AQ03989 594 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 GTF2IRD2BQ6EKJ0 949 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 TTLL10Q6ZVT0 673 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 GTF2IRD2Q86UP8 949 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 CABP7Q86V35 215 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 FAM129CQ86XR2 697 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 TRIM59Q8IWR1 403 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 COPS5Q92905 334 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 MRGPRX3Q96LB0 322 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 RXFP1Q9HBX9 757 aa7.85□□□□□ -1.15
HMGB3P5-201ENST00000428894 B2RBV5 119 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 NPHS1O60500 1241 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 PLS3P13797 630 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 TARBP2Q15633 366 aaKnown RBP7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 SV2CQ496J9 727 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 USP33Q8TEY7 942 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 TINF2Q9BSI4 451 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 MTA3Q9BTC8 594 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 CYP26B1Q9NR63 512 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
HMGB3P5-201ENST00000428894 C7orf72A4D263 438 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 FGRP09769 529 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 FXNQ16595 210 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 VMACQ2NL98 169 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 PWWP2AQ96N64 755 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 MMP19Q99542 508 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 ZCCHC4Q9H5U6 513 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 ZNF408Q9H9D4 720 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 BAZ1AQ9NRL2 1556 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P5-201ENST00000428894 SUSD5O60279 629 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 THBDP07204 575 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 IGFBP6P24592 240 aaPredicted RBP7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 DNAJA1P31689 397 aaKnown RBP7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 LIMS1P48059 325 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 MCF2L2Q86YR7 1114 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms