RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 APOA5Q6Q788 366 aa19.99■□□□□ 0.79
LMCD1-204ENST00000426878 SYNE3Q6ZMZ3 975 aa19.99■□□□□ 0.79
LMCD1-204ENST00000426878 SAMD3Q8N6K7 520 aa19.99■□□□□ 0.79
LMCD1-204ENST00000426878 FANCBQ8NB91 859 aa19.99■□□□□ 0.79
LMCD1-204ENST00000426878 JAKMIP1Q96N16 626 aaKnown RBP19.99■□□□□ 0.79
LMCD1-204ENST00000426878 XPNPEP3Q9NQH7 507 aa19.99■□□□□ 0.79
LMCD1-204ENST00000426878 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
LMCD1-204ENST00000426878 EDNRBP24530 442 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 RCAN1P53805 252 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 LRRC41Q15345 812 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 CCDC144BQ3MJ40 725 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 TBC1D5Q92609 795 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 DPF3Q92784 378 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 VTA1Q9NP79 307 aa19.98■□□□□ 0.79
LMCD1-204ENST00000426878 CEP290O15078 2479 aa19.97■□□□□ 0.79
LMCD1-204ENST00000426878 OPLAHO14841 1288 aa19.97■□□□□ 0.79
LMCD1-204ENST00000426878 GJC2Q5T442 439 aaPredicted RBP19.97■□□□□ 0.79
LMCD1-204ENST00000426878 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
LMCD1-204ENST00000426878 SRBD1Q8N5C6 995 aaKnown RBP19.97■□□□□ 0.79
LMCD1-204ENST00000426878 SYTL5Q8TDW5 730 aaPredicted RBP19.97■□□□□ 0.79
LMCD1-204ENST00000426878 MPHOSPH6Q99547 160 aaKnown RBP19.97■□□□□ 0.79
LMCD1-204ENST00000426878 BRPF3Q9ULD4 1205 aa19.97■□□□□ 0.79
LMCD1-204ENST00000426878 B4DLN1 442 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 KBTBD13C9JR72 458 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 ADAMTS4O75173 837 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 PLEKHA8P1O95397 391 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 RXRAP19793 462 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 RPS6KB1P23443 525 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 HSD17B4P51659 736 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 MRPL12P52815 198 aaKnown RBP19.96■□□□□ 0.79
LMCD1-204ENST00000426878 NKX3-2P78367 333 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 TAPT1Q6NXT6 567 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 RNF180Q86T96 592 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 RRP36Q96EU6 259 aaKnown RBP19.96■□□□□ 0.79
LMCD1-204ENST00000426878 AGXT2Q9BYV1 514 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 NR2E3Q9Y5X4 410 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 LRRC37A2A6NM11 1700 aa19.96■□□□□ 0.79
LMCD1-204ENST00000426878 ADCY6O43306 1168 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 EIF5BO60841 1220 aaKnown RBP19.95■□□□□ 0.78
LMCD1-204ENST00000426878 IQSEC1Q6DN90 963 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 TMTC3Q6ZXV5 915 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 MICU3Q86XE3 530 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 KLHDC9Q8NEP7 349 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 UPF3AQ9H1J1 476 aaKnown RBP19.95■□□□□ 0.78
LMCD1-204ENST00000426878 RBM28Q9NW13 759 aaKnown RBP19.95■□□□□ 0.78
LMCD1-204ENST00000426878 COL20A1Q9P218 1284 aa19.95■□□□□ 0.78
LMCD1-204ENST00000426878 ZBTB43O43298 467 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 EVI5O60447 810 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 PGK1P00558 417 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 CPA1P15085 419 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 TNFAIP2Q03169 654 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 PPP2R5BQ15173 497 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 NSUN6Q8TEA1 469 aaKnown RBP19.94■□□□□ 0.78
LMCD1-204ENST00000426878 LENG1Q96BZ8 264 aaPredicted RBP19.94■□□□□ 0.78
LMCD1-204ENST00000426878 IWS1Q96ST2 819 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 TSEN34Q9BSV6 310 aaKnown RBP19.94■□□□□ 0.78
LMCD1-204ENST00000426878 TM6SF1Q9BZW5 370 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 SENP6Q9GZR1 1112 aaPredicted RBP19.94■□□□□ 0.78
LMCD1-204ENST00000426878 DDX49Q9Y6V7 483 aaKnown RBP19.94■□□□□ 0.78
LMCD1-204ENST00000426878 ALPK3Q96L96 1907 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 SYNRGQ9UMZ2 1314 aa19.94■□□□□ 0.78
LMCD1-204ENST00000426878 RBM47A0AV96 593 aaKnown RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 CFBP00751 764 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 CASTP20810 708 aaKnown RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 CST5P28325 142 aaPredicted RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 ADCYAP1R1P41586 468 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 GJA9P57773 515 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 FGD1P98174 961 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 PDE4DQ08499 809 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 Q6ZUG5 572 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 FBXO16Q8IX29 292 aaPredicted RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 TAAR1Q96RJ0 339 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 RMDN3Q96TC7 470 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 ZSWIM6Q9HCJ5 1215 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 SEC63Q9UGP8 760 aaKnown RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 PHF24Q9UPV7 400 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 GNEQ9Y223 722 aaKnown RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 RTN1Q16799 776 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 CCSAPQ6IQ19 270 aaPredicted RBP19.93■□□□□ 0.78
LMCD1-204ENST00000426878 RUFY3Q7L099 469 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 EEPD1Q7L9B9 569 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 RAB11FIP4Q86YS3 637 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 SPC25Q9HBM1 224 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 PDGFCQ9NRA1 345 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 Q9Y3F1 56 aa19.93■□□□□ 0.78
LMCD1-204ENST00000426878 GCOM1H8Y6P7 765 aaPredicted RBP19.92■□□□□ 0.78
LMCD1-204ENST00000426878 POLR2MP0CAP2 368 aa19.92■□□□□ 0.78
LMCD1-204ENST00000426878 EVCP57679 992 aa19.92■□□□□ 0.78
LMCD1-204ENST00000426878 FUT2Q10981 343 aa19.92■□□□□ 0.78
LMCD1-204ENST00000426878 LRRC26Q2I0M4 334 aa19.92■□□□□ 0.78
LMCD1-204ENST00000426878 CMTR1Q8N1G2 835 aaKnown RBP19.92■□□□□ 0.78
LMCD1-204ENST00000426878 MOXD2PA6NHM9 499 aa19.91■□□□□ 0.78
LMCD1-204ENST00000426878 H0YGN5 161 aa19.91■□□□□ 0.78
LMCD1-204ENST00000426878 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
LMCD1-204ENST00000426878 SMPD1P17405 629 aa19.91■□□□□ 0.78
LMCD1-204ENST00000426878 SNX17Q15036 470 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms