RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 SLC30A10Q6XR72 485 aa27.19■■□□□ 1.94
PDGFA-205ENST00000426681 SHISA4Q96DD7 197 aa27.19■■□□□ 1.94
PDGFA-205ENST00000426681 ADD3Q9UEY8 706 aaKnown RBP27.19■■□□□ 1.94
PDGFA-205ENST00000426681 SEC63Q9UGP8 760 aaKnown RBP27.19■■□□□ 1.94
PDGFA-205ENST00000426681 BRCA2P51587 3418 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 CCDC196A0A1B0GTZ2 297 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 ASB14A6NK59 587 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 OPLAHO14841 1288 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 CALML3P27482 149 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 LHX8Q68G74 356 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 ARMCX2Q7L311 632 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 SAMD3Q8N6K7 520 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 MAP3K20Q9NYL2 800 aaKnown RBP27.18■■□□□ 1.94
PDGFA-205ENST00000426681 NAP1L2Q9ULW6 460 aaPredicted RBP27.18■■□□□ 1.94
PDGFA-205ENST00000426681 CNPY2Q9Y2B0 182 aa27.18■■□□□ 1.94
PDGFA-205ENST00000426681 MCM3APO60318 1980 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 SEPT4O43236 478 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 MSCO60682 206 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 CDC27P30260 824 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 METAP2P50579 478 aaKnown RBP eCLIP27.17■■□□□ 1.94
PDGFA-205ENST00000426681 MORC4Q8TE76 937 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 PIBF1Q8WXW3 757 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 TBC1D5Q92609 795 aa27.17■■□□□ 1.94
PDGFA-205ENST00000426681 PURBQ96QR8 312 aaKnown RBP27.17■■□□□ 1.94
PDGFA-205ENST00000426681 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.17■■□□□ 1.94
PDGFA-205ENST00000426681 DDX20Q9UHI6 824 aaKnown RBP27.17■■□□□ 1.94
PDGFA-205ENST00000426681 TFRCP02786 760 aaKnown RBP27.16■■□□□ 1.94
PDGFA-205ENST00000426681 ZNF865P0CJ78 1059 aaPredicted RBP27.16■■□□□ 1.94
PDGFA-205ENST00000426681 CNGA1P29973 690 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 PDIA3P30101 505 aaKnown RBP27.16■■□□□ 1.94
PDGFA-205ENST00000426681 CCDC82Q8N4S0 544 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 DNERQ8NFT8 737 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 ZNF274Q96GC6 653 aaPredicted RBP27.16■■□□□ 1.94
PDGFA-205ENST00000426681 ABHD16BQ9H3Z7 469 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 OGDHLQ9ULD0 1010 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 CNTNAP5Q8WYK1 1306 aa27.16■■□□□ 1.94
PDGFA-205ENST00000426681 HSD17B4P51659 736 aa27.15■■□□□ 1.94
PDGFA-205ENST00000426681 SYTL5Q8TDW5 730 aaPredicted RBP27.15■■□□□ 1.94
PDGFA-205ENST00000426681 ADD1P35611 737 aaKnown RBP27.14■■□□□ 1.94
PDGFA-205ENST00000426681 ALDH5A1P51649 535 aaPredicted RBP27.14■■□□□ 1.94
PDGFA-205ENST00000426681 KATNBL1Q9H079 304 aa27.14■■□□□ 1.94
PDGFA-205ENST00000426681 ACVR2BQ13705 512 aa27.13■■□□□ 1.93
PDGFA-205ENST00000426681 ANKLE1Q8NAG6 615 aa27.13■■□□□ 1.93
PDGFA-205ENST00000426681 FRMPD3Q5JV73 1810 aa27.12■■□□□ 1.93
PDGFA-205ENST00000426681 CFBP00751 764 aa27.12■■□□□ 1.93
PDGFA-205ENST00000426681 UBE2Q1Q7Z7E8 422 aa27.12■■□□□ 1.93
PDGFA-205ENST00000426681 COL20A1Q9P218 1284 aa27.12■■□□□ 1.93
PDGFA-205ENST00000426681 V9GY48 417 aaPredicted RBP27.12■■□□□ 1.93
PDGFA-205ENST00000426681 hCG_1642624A0A1W2PR95 340 aa27.11■■□□□ 1.93
PDGFA-205ENST00000426681 EDNRBP24530 442 aa27.11■■□□□ 1.93
PDGFA-205ENST00000426681 ANKRD1Q15327 319 aa27.11■■□□□ 1.93
PDGFA-205ENST00000426681 TAAR1Q96RJ0 339 aa27.11■■□□□ 1.93
PDGFA-205ENST00000426681 MPHOSPH6Q99547 160 aaKnown RBP27.11■■□□□ 1.93
PDGFA-205ENST00000426681 B4DLN1 442 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 GCOM1H8Y6P7 765 aaPredicted RBP27.1■■□□□ 1.93
PDGFA-205ENST00000426681 POLR2MP0CAP2 368 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 AKR1A1P14550 325 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 RBM25P49756 843 aaKnown RBP27.1■■□□□ 1.93
PDGFA-205ENST00000426681 MRPL12P52815 198 aaKnown RBP27.1■■□□□ 1.93
PDGFA-205ENST00000426681 NTRK3Q16288 839 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 NSUN6Q8TEA1 469 aaKnown RBP27.1■■□□□ 1.93
PDGFA-205ENST00000426681 C22orf23Q9BZE7 217 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 ZHX1Q9UKY1 873 aaPredicted RBP27.1■■□□□ 1.93
PDGFA-205ENST00000426681 FAM184BQ9ULE4 1060 aa27.1■■□□□ 1.93
PDGFA-205ENST00000426681 IWS1Q96ST2 819 aa27.09■■□□□ 1.93
PDGFA-205ENST00000426681 RMDN3Q96TC7 470 aa27.09■■□□□ 1.93
PDGFA-205ENST00000426681 LARP6Q9BRS8 491 aaKnown RBP27.09■■□□□ 1.93
PDGFA-205ENST00000426681 VTA1Q9NP79 307 aa27.09■■□□□ 1.93
PDGFA-205ENST00000426681 DDX49Q9Y6V7 483 aaKnown RBP27.09■■□□□ 1.93
PDGFA-205ENST00000426681 LRRC37A2A6NM11 1700 aa27.08■■□□□ 1.93
PDGFA-205ENST00000426681 FARP2O94887 1054 aaPredicted RBP27.08■■□□□ 1.93
PDGFA-205ENST00000426681 MNX1P50219 401 aaPredicted RBP27.08■■□□□ 1.93
PDGFA-205ENST00000426681 NEK4P51957 841 aa27.08■■□□□ 1.93
PDGFA-205ENST00000426681 AK2P54819 239 aa27.08■■□□□ 1.93
PDGFA-205ENST00000426681 CCT2P78371 535 aaKnown RBP27.08■■□□□ 1.93
PDGFA-205ENST00000426681 MLLT1Q03111 559 aaPredicted RBP27.08■■□□□ 1.93
PDGFA-205ENST00000426681 CCDC144BQ3MJ40 725 aa27.08■■□□□ 1.93
PDGFA-205ENST00000426681 KIF2CQ99661 725 aa27.08■■□□□ 1.93
PDGFA-205ENST00000426681 RBM27Q9P2N5 1060 aaKnown RBP27.08■■□□□ 1.93
PDGFA-205ENST00000426681 hCG_1984214I3L0E3 225 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 PIK3CDO00329 1044 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 PRPF3O43395 683 aaKnown RBP27.07■■□□□ 1.92
PDGFA-205ENST00000426681 RARBP10826 455 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 IFNAR1P17181 557 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 HOXA13P31271 388 aaPredicted RBP27.07■■□□□ 1.92
PDGFA-205ENST00000426681 PDE4DQ08499 809 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 HEATR3Q7Z4Q2 680 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 ZNF713Q8N859 430 aaPredicted RBP27.07■■□□□ 1.92
PDGFA-205ENST00000426681 NCOA5Q9HCD5 579 aaKnown RBP27.07■■□□□ 1.92
PDGFA-205ENST00000426681 TPCN1Q9ULQ1 816 aa27.07■■□□□ 1.92
PDGFA-205ENST00000426681 WWC2Q6AWC2 1192 aa27.06■■□□□ 1.92
PDGFA-205ENST00000426681 TAPT1Q6NXT6 567 aa27.06■■□□□ 1.92
PDGFA-205ENST00000426681 TEX2Q8IWB9 1127 aa27.06■■□□□ 1.92
PDGFA-205ENST00000426681 GPKOWQ92917 476 aaPredicted RBP eCLIP27.06■■□□□ 1.92
PDGFA-205ENST00000426681 PSTPIP2Q9H939 334 aa27.06■■□□□ 1.92
PDGFA-205ENST00000426681 UPF2Q9HAU5 1272 aaKnown RBP27.06■■□□□ 1.92
PDGFA-205ENST00000426681 PXMP2Q9NR77 195 aa27.06■■□□□ 1.92
PDGFA-205ENST00000426681 PFKFB3Q16875 520 aaPredicted RBP27.05■■□□□ 1.92
PDGFA-205ENST00000426681 ARHGEF16Q5VV41 709 aa27.05■■□□□ 1.92
PDGFA-205ENST00000426681 ANO1Q5XXA6 986 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms