RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 GLT1D1Q96MS3 346 aa21.59■■□□□ 1.05
NUP50-207ENST00000424634 VTA1Q9NP79 307 aa21.59■■□□□ 1.05
NUP50-207ENST00000424634 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
NUP50-207ENST00000424634 PARP1P09874 1014 aaKnown RBP21.58■■□□□ 1.05
NUP50-207ENST00000424634 SHHQ15465 462 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 KIAA1211Q6ZU35 1233 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 STOX1Q6ZVD7 989 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 TLK2Q86UE8 772 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 VTI1AQ96AJ9 217 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 JMJD4Q9H9V9 463 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 VAT1LQ9HCJ6 419 aa21.58■■□□□ 1.05
NUP50-207ENST00000424634 COL6A3P12111 3177 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 LOC102724159A0A0B4J2E5 919 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 PWP2Q15269 919 aaKnown RBP21.57■■□□□ 1.04
NUP50-207ENST00000424634 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 C9orf50Q5SZB4 431 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 GPR153Q6NV75 609 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 RGS22Q8NE09 1264 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 MAP4K1Q92918 833 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 SENP2Q9HC62 589 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 TMEM39AQ9NV64 488 aa21.57■■□□□ 1.04
NUP50-207ENST00000424634 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
NUP50-207ENST00000424634 DCDC2CA8MYV0 355 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 E7EWF7 191 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 ARVCFO00192 962 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 EDNRBP24530 442 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 TRDNQ13061 729 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 FSCN1Q16658 493 aaKnown RBP21.56■■□□□ 1.04
NUP50-207ENST00000424634 CXCL17Q6UXB2 119 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 SKAP1Q86WV1 359 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 AP5M1Q9H0R1 490 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 MAD2L2Q9UI95 211 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 Q9Y3F1 56 aa21.56■■□□□ 1.04
NUP50-207ENST00000424634 A0A0U1RQG5 324 aaPredicted RBP21.55■■□□□ 1.04
NUP50-207ENST00000424634 RAG1P15918 1043 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 EPHB4P54760 987 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 DUSP28Q4G0W2 176 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 Q7L0L9 218 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 CHST3Q7LGC8 479 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 DNERQ8NFT8 737 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 WDR11Q9BZH6 1224 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 BAZ2BQ9UIF8 2168 aaKnown RBP21.55■■□□□ 1.04
NUP50-207ENST00000424634 GRIN2DO15399 1336 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 ABCB11O95342 1321 aa21.55■■□□□ 1.04
NUP50-207ENST00000424634 PALM3A6NDB9 673 aaPredicted RBP21.54■■□□□ 1.04
NUP50-207ENST00000424634 KLRF2D3W0D1 207 aa21.54■■□□□ 1.04
NUP50-207ENST00000424634 SLC35G1Q2M3R5 365 aa21.54■■□□□ 1.04
NUP50-207ENST00000424634 SLC43A3Q8NBI5 491 aa21.54■■□□□ 1.04
NUP50-207ENST00000424634 COL20A1Q9P218 1284 aa21.54■■□□□ 1.04
NUP50-207ENST00000424634 TBX21Q9UL17 535 aa21.54■■□□□ 1.04
NUP50-207ENST00000424634 RBM8AQ9Y5S9 174 aaKnown RBP21.54■■□□□ 1.04
NUP50-207ENST00000424634 IFIT3O14879 490 aaKnown RBP21.53■■□□□ 1.04
NUP50-207ENST00000424634 DHX16O60231 1041 aaKnown RBP21.53■■□□□ 1.04
NUP50-207ENST00000424634 ANTXR2P58335 489 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 PDE4DQ08499 809 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 FBXO11Q86XK2 927 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 FAM126BQ8IXS8 530 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 DEFB123Q8N688 67 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 NCOA7Q8NI08 942 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 SYTL5Q8TDW5 730 aaPredicted RBP21.53■■□□□ 1.04
NUP50-207ENST00000424634 MTMR8Q96EF0 704 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 TAAR1Q96RJ0 339 aa21.53■■□□□ 1.04
NUP50-207ENST00000424634 PPP1R11O60927 126 aaPredicted RBP21.52■■□□□ 1.04
NUP50-207ENST00000424634 TIMP1P01033 207 aa21.52■■□□□ 1.04
NUP50-207ENST00000424634 LSG1Q9H089 658 aaKnown RBP21.52■■□□□ 1.04
NUP50-207ENST00000424634 MROH7Q68CQ1 1323 aa21.52■■□□□ 1.03
NUP50-207ENST00000424634 OPLAHO14841 1288 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 CABYRO75952 493 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 CD4P01730 458 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 ITGA7Q13683 1181 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 GRM4Q14833 912 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 RALYLQ86SE5 291 aaKnown RBP21.51■■□□□ 1.03
NUP50-207ENST00000424634 MB21D2Q8IYB1 491 aaPredicted RBP21.51■■□□□ 1.03
NUP50-207ENST00000424634 IGDCC4Q8TDY8 1250 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 MAF1Q9H063 256 aa21.51■■□□□ 1.03
NUP50-207ENST00000424634 MRPL11Q9Y3B7 192 aaKnown RBP21.51■■□□□ 1.03
NUP50-207ENST00000424634 ZEB2O60315 1214 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 PSMC6P62333 389 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 TROAPQ12815 778 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 COL9A3Q14050 684 aaPredicted RBP21.5■■□□□ 1.03
NUP50-207ENST00000424634 WTAPQ15007 396 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 MCF2L2Q86YR7 1114 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 COPS5Q92905 334 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 ESYT1Q9BSJ8 1104 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 MTMR10Q9NXD2 777 aa21.5■■□□□ 1.03
NUP50-207ENST00000424634 ARIH2O95376 493 aa21.49■■□□□ 1.03
NUP50-207ENST00000424634 FPGSQ05932 587 aa21.49■■□□□ 1.03
NUP50-207ENST00000424634 SCFD2Q8WU76 684 aa21.49■■□□□ 1.03
NUP50-207ENST00000424634 MPHOSPH6Q99547 160 aaKnown RBP21.49■■□□□ 1.03
NUP50-207ENST00000424634 AMNQ9BXJ7 453 aa21.49■■□□□ 1.03
NUP50-207ENST00000424634 RIOX1Q9H6W3 641 aa21.49■■□□□ 1.03
NUP50-207ENST00000424634 GPHNQ9NQX3 736 aaPredicted RBP21.49■■□□□ 1.03
NUP50-207ENST00000424634 ERICH2A1L162 156 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 ZBTB5O15062 677 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 CYTH3O43739 400 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 TMEM67Q5HYA8 995 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 MFSD5Q6N075 450 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 CENPQQ7L2Z9 268 aaPredicted RBP21.48■■□□□ 1.03
NUP50-207ENST00000424634 OR6J1Q8NGC5 347 aa21.48■■□□□ 1.03
NUP50-207ENST00000424634 NSUN6Q8TEA1 469 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms