RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ERICH2A1L162 156 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 B4DLN1 442 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 ARVCFO00192 962 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 ITGB8P26012 769 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 CST5P28325 142 aaPredicted RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 CDK7P50613 346 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 MRPL12P52815 198 aaKnown RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 FSCN1Q16658 493 aaKnown RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 QRICH1Q2TAL8 776 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 C9orf50Q5SZB4 431 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 Q7L0L9 218 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 RALYLQ86SE5 291 aaKnown RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 FBXO11Q86XK2 927 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 MORC4Q8TE76 937 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 JMJD4Q9H9V9 463 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 GNEQ9Y223 722 aaKnown RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
NUP50-206ENST00000422489 ABCB11O95342 1321 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 E7EWF7 191 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 KIAA0355O15063 1070 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 CTAGE5O15320 804 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 SGSM2O43147 1006 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 CABYRO75952 493 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 MYL3P08590 195 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 FPGSQ05932 587 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 WTAPQ15007 396 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 SEC23AQ15436 765 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 ANKRD33Q7Z3H0 272 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 MCF2L2Q86YR7 1114 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 STAG2Q8N3U4 1231 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 TAAR1Q96RJ0 339 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 GPHNQ9NQX3 736 aaPredicted RBP10.83□□□□□ -0.68
NUP50-206ENST00000422489 MRPL11Q9Y3B7 192 aaKnown RBP10.83□□□□□ -0.68
NUP50-206ENST00000422489 Q9Y3F1 56 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
NUP50-206ENST00000422489 CEP290O15078 2479 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 PARP14Q460N5 1801 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 TIMP1P01033 207 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 EPHB4P54760 987 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 PSMC6P62333 389 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 ITGA7Q13683 1181 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 DUSP28Q4G0W2 176 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 ARHGEF16Q5VV41 709 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 DNERQ8NFT8 737 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 FAM161BQ96MY7 647 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 AMNQ9BXJ7 453 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 RBM8AQ9Y5S9 174 aaKnown RBP10.82□□□□□ -0.68
NUP50-206ENST00000422489 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
NUP50-206ENST00000422489 LOC102724159A0A0B4J2E5 919 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 RBM47A0AV96 593 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 CFBP00751 764 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 TXNP10599 105 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 NKX3-2P78367 333 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 SART3Q15020 963 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 PWP2Q15269 919 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 BRDTQ58F21 947 aaPredicted RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 SEPT14Q6ZU15 432 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 SKAP1Q86WV1 359 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 SYTL5Q8TDW5 730 aaPredicted RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 NSUN6Q8TEA1 469 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 SCFD2Q8WU76 684 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 PIBF1Q8WXW3 757 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 COPS5Q92905 334 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 MAP4K1Q92918 833 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 RNPC3Q96LT9 517 aaKnown RBP10.81□□□□□ -0.68
NUP50-206ENST00000422489 RMDN3Q96TC7 470 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 POLR3EQ9NVU0 708 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 PCDHA1Q9Y5I3 950 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 ALPK3Q96L96 1907 aa10.81□□□□□ -0.68
NUP50-206ENST00000422489 PALM3A6NDB9 673 aaPredicted RBP10.8□□□□□ -0.68
NUP50-206ENST00000422489 EIF2AK2P19525 551 aaKnown RBP10.8□□□□□ -0.68
NUP50-206ENST00000422489 CPT1AP50416 773 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 FAM47CQ5HY64 1035 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 MFSD5Q6N075 450 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 STOX1Q6ZVD7 989 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 CATIPQ7Z7H3 387 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 FAM126BQ8IXS8 530 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 TMEM199Q8N511 208 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 PIGSQ96S52 555 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 TRPV6Q9H1D0 765 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 TBX21Q9UL17 535 aa10.8□□□□□ -0.68
NUP50-206ENST00000422489 GRIN2DO15399 1336 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms