RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 ZNF569Q5MCW4 686 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 CDKAL1Q5VV42 579 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 PDXDC2PQ6P474 469 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 FCHSD1Q86WN1 690 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 TFR2Q9UP52 801 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 ADGRG1Q9Y653 693 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 STXBP3O00186 592 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
SEC24D-202ENST00000419654 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 CXCL9Q07325 125 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
SEC24D-202ENST00000419654 FILIP1LQ4L180 1135 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 BLIDQ8IZY5 108 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 MTMR14Q8NCE2 650 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
SEC24D-202ENST00000419654 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 PCDHA4Q9UN74 947 aa17.18■□□□□ 0.34
SEC24D-202ENST00000419654 M0R2N6 131 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 NFKBIEO00221 500 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 STAT6P42226 847 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 PRCPP42785 496 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 GPIHBP1Q8IV16 184 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 DAGLBQ8NCG7 672 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 MFAP3LO75121 409 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 PMS1P54277 932 aaKnown RBP17.17■□□□□ 0.34
SEC24D-202ENST00000419654 BMS1Q14692 1282 aaKnown RBP17.17■□□□□ 0.34
SEC24D-202ENST00000419654 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
SEC24D-202ENST00000419654 ZNF70Q9UC06 446 aaPredicted RBP17.17■□□□□ 0.34
SEC24D-202ENST00000419654 PLA2G4AP47712 749 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 TERF2Q15554 542 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 MKL1Q969V6 931 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 RRP36Q96EU6 259 aaKnown RBP17.17■□□□□ 0.34
SEC24D-202ENST00000419654 TRIM34Q9BYJ4 488 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 TMOD2Q9NZR1 351 aa17.17■□□□□ 0.34
SEC24D-202ENST00000419654 EFCAB8A8MWE9 144 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 RPN1P04843 607 aaKnown RBP17.16■□□□□ 0.34
SEC24D-202ENST00000419654 ERVK-24P63145 666 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 PAK1Q13153 545 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
SEC24D-202ENST00000419654 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 BMP15O95972 392 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 PBX1P40424 430 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 PTGER2P43116 358 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
SEC24D-202ENST00000419654 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 TRIM10Q9UDY6 481 aa17.16■□□□□ 0.34
SEC24D-202ENST00000419654 FRMPD2Q68DX3 1309 aaPredicted RBP17.15■□□□□ 0.34
SEC24D-202ENST00000419654 KCNJ18B7U540 433 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 SASH3O75995 380 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 COPB1P53618 953 aaKnown RBP17.15■□□□□ 0.34
SEC24D-202ENST00000419654 UBXN1Q04323 297 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 KCNJ12Q14500 433 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
SEC24D-202ENST00000419654 PANX2Q96RD6 677 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 CHP1Q99653 195 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 TUBB4AP04350 444 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 TMEM179Q6ZVK1 233 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 LRRC15Q8TF66 581 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 FAM151AQ8WW52 585 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEC24D-202ENST00000419654 PIGSQ96S52 555 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 PARD6BQ9BYG5 372 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
SEC24D-202ENST00000419654 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
SEC24D-202ENST00000419654 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
SEC24D-202ENST00000419654 KIF4BQ2VIQ3 1234 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 SIAH1Q8IUQ4 282 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 SLC35F6Q8N357 371 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 C4orf32Q8N8J7 132 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 FAM53CQ9NYF3 392 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 SEC63Q9UGP8 760 aaKnown RBP17.14■□□□□ 0.33
SEC24D-202ENST00000419654 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
SEC24D-202ENST00000419654 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
SEC24D-202ENST00000419654 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
SEC24D-202ENST00000419654 HPS3Q969F9 1004 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
SEC24D-202ENST00000419654 ERCC3P19447 782 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 KRT9P35527 623 aa17.13■□□□□ 0.33
SEC24D-202ENST00000419654 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms