RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 ZBTB5O15062 677 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 PRC1O43663 620 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 DDAH1O94760 285 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 SYN1P17600 705 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 TROAPQ12815 778 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 IQSEC1Q6DN90 963 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 MTMR8Q96EF0 704 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 MAP3K14Q99558 947 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 LTBP2Q14767 1821 aa18.25■□□□□ 0.51
MCF2L-211ENST00000413354 ADCY6O43306 1168 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 SLC34A2O95436 690 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 KIF5BP33176 963 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 BMP8BP34820 402 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 ACLYP53396 1101 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 NKX3-2P78367 333 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 PDE4DQ08499 809 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 KCNA10Q16322 511 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 TLK2Q86UE8 772 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-211ENST00000413354 PURBQ96QR8 312 aaKnown RBP18.24■□□□□ 0.51
MCF2L-211ENST00000413354 GDF15Q99988 308 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 AP5M1Q9H0R1 490 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 LY9Q9HBG7 655 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 SENP2Q9HC62 589 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 STARD7Q9NQZ5 370 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 Q9Y3F1 56 aa18.24■□□□□ 0.51
MCF2L-211ENST00000413354 KIAA1217Q5T5P2 1943 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 CCDC69A6NI79 296 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 EDNRBP24530 442 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-211ENST00000413354 TRIM60Q495X7 471 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 ERICH6BQ5W0A0 696 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 CCSAPQ6IQ19 270 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-211ENST00000413354 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 ZNF654Q8IZM8 581 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 GLT1D1Q96MS3 346 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
MCF2L-211ENST00000413354 ELP1O95163 1332 aa18.23■□□□□ 0.51
MCF2L-211ENST00000413354 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-211ENST00000413354 MYADML2A6NDP7 307 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-211ENST00000413354 ZEB2O60315 1214 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-211ENST00000413354 CALM1P0DP23 149 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 CALM2P0DP24 149 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 CALM3P0DP25 149 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 LIFRP42702 1097 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 KRT32Q14532 448 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
MCF2L-211ENST00000413354 LZTS2Q9BRK4 669 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 MAP3K20Q9NYL2 800 aaKnown RBP18.22■□□□□ 0.51
MCF2L-211ENST00000413354 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
MCF2L-211ENST00000413354 DNAH12Q6ZR08 3092 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 NKRFO15226 690 aaKnown RBP eCLIP18.21■□□□□ 0.51
MCF2L-211ENST00000413354 CABYRO75952 493 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 ASGR1P07306 291 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 SMPD1P17405 629 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 GNAQP50148 359 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 DUSP28Q4G0W2 176 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 SYTL5Q8TDW5 730 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-211ENST00000413354 NSUN6Q8TEA1 469 aaKnown RBP18.21■□□□□ 0.51
MCF2L-211ENST00000413354 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 PCDHA1Q9Y5I3 950 aa18.21■□□□□ 0.51
MCF2L-211ENST00000413354 DDX49Q9Y6V7 483 aaKnown RBP18.21■□□□□ 0.51
MCF2L-211ENST00000413354 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 A0A0U1RQG5 324 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 RBM47A0AV96 593 aaKnown RBP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 GHRHRQ02643 423 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 FSCN1Q16658 493 aaKnown RBP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 TSGA10IPQ3SY00 556 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 SCFD2Q8WU76 684 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 NEK1Q96PY6 1258 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 PIGSQ96S52 555 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 IWS1Q96ST2 819 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 SPZ1Q9BXG8 430 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 WDR11Q9BZH6 1224 aa18.2■□□□□ 0.5
MCF2L-211ENST00000413354 UBE2OQ9C0C9 1292 aaKnown RBP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 PRDM5Q9NQX1 630 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-211ENST00000413354 CTAGE5O15320 804 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 DYNC1LI2O43237 492 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-211ENST00000413354 CYTH3O43739 400 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 PQBP1O60828 265 aaKnown RBP18.19■□□□□ 0.5
MCF2L-211ENST00000413354 CFBP00751 764 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 CLTBP09497 229 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 SMARCA1P28370 1054 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 HSD17B4P51659 736 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 TLE2Q04725 743 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 PPP2R5BQ15173 497 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 VTI1AQ96AJ9 217 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 TOX2Q96NM4 488 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 RMDN3Q96TC7 470 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 PDLIM7Q9NR12 457 aa18.19■□□□□ 0.5
MCF2L-211ENST00000413354 PPP4R2Q9NY27 417 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms