RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 RASGRP2Q7LDG7 609 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 RALYLQ86SE5 291 aaKnown RBP16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 SAMD3Q8N6K7 520 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 CLEC4DQ8WXI8 215 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 AP5M1Q9H0R1 490 aa16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 MAP3K20Q9NYL2 800 aaKnown RBP16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
NIF3L1-205ENST00000409588 ABCB11O95342 1321 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 CYP21A2P08686 494 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 C7P10643 843 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 TLE2Q04725 743 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 SEC23AQ15436 765 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 IL25Q9H293 177 aa16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 MRPL11Q9Y3B7 192 aaKnown RBP16.96■□□□□ 0.31
NIF3L1-205ENST00000409588 LAMA4Q16363 1823 aa16.96■□□□□ 0.3
NIF3L1-205ENST00000409588 RBM47A0AV96 593 aaKnown RBP16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 NFIBO00712 420 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 ASGR1P07306 291 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 CLTBP09497 229 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 MDM2Q00987 491 aaPredicted RBP16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 PTH1RQ03431 593 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 TAPT1Q6NXT6 567 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 TMTC2Q8N394 836 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 UBA5Q9GZZ9 404 aa16.95■□□□□ 0.3
NIF3L1-205ENST00000409588 E7EWF7 191 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 CDK7P50613 346 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 DUSP28Q4G0W2 176 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 FBXO11Q86XK2 927 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 PDLIM7Q9NR12 457 aa16.94■□□□□ 0.3
NIF3L1-205ENST00000409588 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 PALM3A6NDB9 673 aaPredicted RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 ARVCFO00192 962 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 SMPD1P17405 629 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 CALML3P27482 149 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 PDE4DQ08499 809 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 FSCN1Q16658 493 aaKnown RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 BRDTQ58F21 947 aaPredicted RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 TLK2Q86UE8 772 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 IWS1Q96ST2 819 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 MAP3K14Q99558 947 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 AMNQ9BXJ7 453 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 PRDM5Q9NQX1 630 aaPredicted RBP16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 TMEM39AQ9NV64 488 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 ASTN1O14525 1302 aa16.93■□□□□ 0.3
NIF3L1-205ENST00000409588 CTAGE5O15320 804 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 ADCY6O43306 1168 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 KPNA6O60684 536 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 RAG1P15918 1043 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 EDNRBP24530 442 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 WTAPQ15007 396 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 CYB5R4Q7L1T6 521 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 NSUN6Q8TEA1 469 aaKnown RBP16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 SCFD2Q8WU76 684 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 MTMR8Q96EF0 704 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
NIF3L1-205ENST00000409588 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 TRIM43BA6NCK2 446 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 ZBTB5O15062 677 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 PQBP1O60828 265 aaKnown RBP16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 CPT1AP50416 773 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 USH1GQ495M9 461 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 CASC1Q6TDU7 716 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 BADQ92934 168 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 TRIM43Q96BQ3 446 aaPredicted RBP16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 PDGFCQ9NRA1 345 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 POLR3EQ9NVU0 708 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 MAD2L2Q9UI95 211 aa16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
NIF3L1-205ENST00000409588 MYADML2A6NDP7 307 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 TIMP1P01033 207 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 GHRHRQ02643 423 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 TROAPQ12815 778 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
NIF3L1-205ENST00000409588 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms