RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 FAM84BQ96KN1 310 aaPredicted RBP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 NBPF3Q9H094 633 aa18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 ALDH8A1Q9H2A2 487 aaPredicted RBP18.53■□□□□ 0.56
PCDHA13-202ENST00000409494 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 KLHL30Q0D2K2 578 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 SPECC1LQ69YQ0 1117 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 DHTKD1Q96HY7 919 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 PIGSQ96S52 555 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 ARHGEF37A1IGU5 675 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 MAPK8IP1Q9UQF2 711 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 STAT1P42224 750 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 MAGEA1P43355 309 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 NELFCDQ8IXH7 590 aa18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 DCP1AQ9NPI6 582 aaPredicted RBP18.52■□□□□ 0.56
PCDHA13-202ENST00000409494 PRDX5P30044 214 aa18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 PSMD2Q13200 908 aa18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 PRR5LQ6MZQ0 368 aa18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 GBP6Q6ZN66 633 aa18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 MAEAQ7L5Y9 396 aa18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 IPO4Q8TEX9 1081 aaKnown RBP18.52■□□□□ 0.55
PCDHA13-202ENST00000409494 GPSM2P81274 684 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 CDC37Q16543 378 aaPredicted RBP18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 BCCIPQ9P287 314 aaKnown RBP eCLIP18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 RPN1P04843 607 aaKnown RBP18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 IQCGQ9H095 443 aaKnown RBP18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 K7ENM7 598 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 BPIFB4P59827 614 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 SPICE1Q8N0Z3 855 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 METTL13Q8N6R0 699 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 ARHGAP23Q9P227 1491 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 ELF2Q15723 593 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 TBCKQ8TEA7 893 aa18.51■□□□□ 0.55
PCDHA13-202ENST00000409494 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 FAM47CQ5HY64 1035 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ODR4Q5SWX8 454 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 CROCCP2Q86T23 111 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 TMEM206Q9H813 350 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 TAB2Q9NYJ8 693 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ZNF215Q9UL58 517 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 STK10O94804 968 aaKnown RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 FEZ2Q9UHY8 353 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 USP17L2Q6R6M4 530 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 OR8K1Q8NGG5 319 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 XPO4Q9C0E2 1151 aaKnown RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ABCB11O95342 1321 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 GH2P01242 217 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 CAPN2P17655 700 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 RNF187Q5TA31 235 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ARFGAP2Q8N6H7 521 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 NEDD1Q8NHV4 660 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 SYMPKQ92797 1274 aaKnown RBP18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 DYNLL2Q96FJ2 89 aa18.5■□□□□ 0.55
PCDHA13-202ENST00000409494 ENTPD3O75355 529 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 GPR161Q8N6U8 529 aaKnown RBP18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 CCDC97Q96F63 343 aaPredicted RBP18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 TMEM110-MUSTN1A8MSY1 372 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 RHOXF2BP0C7M4 288 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 CD19P15391 556 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 SEMA3FQ13275 785 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 PPP2R5EQ16537 467 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 MRFAP1L1Q96HT8 127 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 NAPGQ99747 312 aaPredicted RBP18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 RHOXF2Q9BQY4 288 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 C1orf112Q9NSG2 853 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 PSAPP07602 524 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 SLFN14P0C7P3 912 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 MORC3Q14149 939 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 ZBTB5O15062 677 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 ACTN4O43707 911 aaKnown RBP18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 LRMPQ12912 555 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 HHIPL2Q6UWX4 724 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 CARD6Q9BX69 1037 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 BLZF1Q9H2G9 400 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 GINM1Q9NU53 330 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
PCDHA13-202ENST00000409494 PNOCQ13519 176 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 DCUN1D2Q6PH85 259 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 NEK9Q8TD19 979 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 TSC1Q92574 1164 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 USP17L10C9JJH3 530 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 RPS12P25398 132 aaKnown RBP18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 SURF1Q15526 300 aa18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 TDRD3Q9H7E2 651 aaKnown RBP18.48■□□□□ 0.55
PCDHA13-202ENST00000409494 KIAA1024Q9UPX6 916 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms