RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SMARCA1P28370 1054 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 SHMT1P34896 483 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 TMC4Q7Z404 712 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 JMJD4Q9H9V9 463 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 ABHD10Q9NUJ1 306 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 KRT9P35527 623 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 CALCRLQ16602 461 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 SHROOM1Q2M3G4 852 aaPredicted RBP26.63■■□□□ 1.85
PABPN1-202ENST00000397276 ASPRV1Q53RT3 343 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 KIAA0825Q8IV33 1275 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 GJA10Q969M2 543 aa26.63■■□□□ 1.85
PABPN1-202ENST00000397276 NAA15Q9BXJ9 866 aaKnown RBP26.63■■□□□ 1.85
PABPN1-202ENST00000397276 EXOC1Q9NV70 894 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 ITIH6Q6UXX5 1313 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 MMP10P09238 476 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 NPR1P16066 1061 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 ERVK-24P63145 666 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 APOBEC3HQ6NTF7 200 aaKnown RBP26.62■■□□□ 1.85
PABPN1-202ENST00000397276 TEKT1Q969V4 418 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 LRWD1Q9UFC0 647 aa26.62■■□□□ 1.85
PABPN1-202ENST00000397276 POTEMA6NI47 508 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 ABL1P00519 1130 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 RBM5P52756 815 aaKnown RBP eCLIP26.61■■□□□ 1.851e-6■□□□□ 8
PABPN1-202ENST00000397276 GYS2P54840 703 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 NLGN1Q8N2Q7 840 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 KIFC2Q96AC6 838 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 TMX4Q9H1E5 349 aaPredicted RBP26.61■■□□□ 1.85
PABPN1-202ENST00000397276 IGKV6D-41A0A0C4DH26 115 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 PPP1R11O60927 126 aaPredicted RBP26.61■■□□□ 1.85
PABPN1-202ENST00000397276 CSGALNACT2Q8N6G5 542 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 CALML4Q96GE6 196 aa26.61■■□□□ 1.85
PABPN1-202ENST00000397276 ARGLU1Q9NWB6 273 aaPredicted RBP26.61■■□□□ 1.85
PABPN1-202ENST00000397276 EDIL3O43854 480 aa26.6■■□□□ 1.85
PABPN1-202ENST00000397276 ZNF543Q08ER8 600 aa26.6■■□□□ 1.85
PABPN1-202ENST00000397276 USP17L10C9JJH3 530 aa26.6■■□□□ 1.85
PABPN1-202ENST00000397276 TBC1D8O95759 1140 aa26.6■■□□□ 1.85
PABPN1-202ENST00000397276 MYL1P05976 194 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 SNHG28P0DPA3 235 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 ALDH1B1P30837 517 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 TTI2Q6NXR4 508 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 DYMQ7RTS9 669 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 SLC39A2Q9NP94 309 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 MAGEC2Q9UBF1 373 aaPredicted RBP26.59■■□□□ 1.85
PABPN1-202ENST00000397276 ESYT2A0FGR8 921 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 HLA-DOAP06340 250 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 MCM6Q14566 821 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 TEX35Q5T0J7 233 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 ANKRD40Q6AI12 368 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 CHP1Q99653 195 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 SUGT1Q9Y2Z0 365 aa26.59■■□□□ 1.85
PABPN1-202ENST00000397276 B4DLN1 442 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 MAP3K9P80192 1104 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 MB21D1Q8N884 522 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 MTMR9Q96QG7 549 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 DUSP9Q99956 384 aaKnown RBP26.58■■□□□ 1.85
PABPN1-202ENST00000397276 NUDT12Q9BQG2 462 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 CUEDC2Q9H467 287 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 ZSWIM4Q9H7M6 989 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 TTC26A0AVF1 554 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 CRKP46108 304 aa26.58■■□□□ 1.85
PABPN1-202ENST00000397276 PNMA6FA0A0J9YX94 578 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 EFCAB8A8MWE9 144 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 GRB10Q13322 594 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 ZSCAN29Q8IWY8 852 aaPredicted RBP26.58■■□□□ 1.84
PABPN1-202ENST00000397276 CCDC47Q96A33 483 aaKnown RBP26.58■■□□□ 1.84
PABPN1-202ENST00000397276 CDK5RAP3Q96JB5 506 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 SLF1Q9BQI6 1058 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 SWAP70Q9UH65 585 aa26.58■■□□□ 1.84
PABPN1-202ENST00000397276 PLIN4Q96Q06 1357 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 NKRFO15226 690 aaKnown RBP eCLIP26.57■■□□□ 1.84
PABPN1-202ENST00000397276 OAS2P29728 719 aaKnown RBP26.57■■□□□ 1.84
PABPN1-202ENST00000397276 ZNF569Q5MCW4 686 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 CCDC51Q96ER9 411 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 C7orf25Q9BPX7 421 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 TMTC1Q8IUR5 882 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 P2RX5Q93086 422 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 MRFAP1Q9Y605 127 aa26.57■■□□□ 1.84
PABPN1-202ENST00000397276 TULP2O00295 520 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 APBA3O96018 575 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 PPP2R3AQ06190 1150 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 CC2D1AQ6P1N0 951 aaPredicted RBP26.56■■□□□ 1.84
PABPN1-202ENST00000397276 SV2BQ7L1I2 683 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 TUBGCP2Q9BSJ2 902 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 THAP9Q9H5L6 903 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 KIF5CO60282 957 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 AMPD3Q01432 767 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 BLOC1S4Q9NUP1 217 aa26.56■■□□□ 1.84
PABPN1-202ENST00000397276 LGALS16A8MUM7 142 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 EEF1GP26641 437 aaKnown RBP26.55■■□□□ 1.84
PABPN1-202ENST00000397276 PDE6BP35913 854 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 KLK7P49862 253 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 CYP26C1Q6V0L0 522 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 DHTKD1Q96HY7 919 aaPredicted RBP26.55■■□□□ 1.84
PABPN1-202ENST00000397276 PNMA5Q96PV4 448 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 DNAJC18Q9H819 358 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 MYMKA6NI61 221 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 MARCH6O60337 910 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 TMEM266Q2M3C6 531 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 HHIPL2Q6UWX4 724 aa26.55■■□□□ 1.84
PABPN1-202ENST00000397276 KIAA0895Q8NCT3 520 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms