RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 VPS16Q9H269 839 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 PI4KBQ9UBF8 816 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 FAM198AQ9UFP1 575 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 SERPINA10Q9UK55 444 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 MYH7BA7E2Y1 1941 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 A0A1W2PQC6 194 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 TRIM49BA6NDI0 452 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 TDP2O95551 362 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 TXKP42681 527 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
NUP50-202ENST00000396096 CCDC96Q2M329 555 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 TATDN1Q6P1N9 297 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 EXOC1Q9NV70 894 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
NUP50-202ENST00000396096 BICDL2A1A5D9 508 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 LGALS16A8MUM7 142 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 GCFC2P16383 781 aaKnown RBP18.83■□□□□ 0.6
NUP50-202ENST00000396096 CCNE1P24864 410 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 PDE4DQ08499 809 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 CNNM4Q6P4Q7 775 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 KIAA0825Q8IV33 1275 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 PNMA5Q96PV4 448 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 NAP1L4Q99733 375 aaKnown RBP18.83■□□□□ 0.6
NUP50-202ENST00000396096 DUSP9Q99956 384 aaKnown RBP18.83■□□□□ 0.6
NUP50-202ENST00000396096 KANSL2Q9H9L4 492 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.6
NUP50-202ENST00000396096 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
NUP50-202ENST00000396096 COL2A1P02458 1487 aaPredicted RBP18.83■□□□□ 0.6
NUP50-202ENST00000396096 DDTLA6NHG4 134 aaPredicted RBP18.82■□□□□ 0.6
NUP50-202ENST00000396096 ASIC1P78348 528 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 MTF1Q14872 753 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 SH3BP5LQ7L8J4 393 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 TMTC1Q8IUR5 882 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 ZNF507Q8TCN5 953 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 CPLX3Q8WVH0 158 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 P2RX5Q93086 422 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 TRIM47Q96LD4 638 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 PVALEFA0A1B0GWK0 134 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 TNNI2P48788 182 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 CERKLQ49MI3 558 aaPredicted RBP18.82■□□□□ 0.6
NUP50-202ENST00000396096 KCTD1Q719H9 257 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 SV2BQ7L1I2 683 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 MB21D1Q8N884 522 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 CNKSR1Q969H4 720 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 ABHD10Q9NUJ1 306 aa18.82■□□□□ 0.6
NUP50-202ENST00000396096 PSME4Q14997 1843 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 ATRNL1Q5VV63 1379 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 EEF2P13639 858 aaKnown RBP18.81■□□□□ 0.6
NUP50-202ENST00000396096 SLC16A2P36021 539 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 ATP2B2Q01814 1243 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 UBXN1Q04323 297 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 UBE2SQ16763 222 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 TMEM119Q4V9L6 283 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
NUP50-202ENST00000396096 DESI2Q9BSY9 194 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 PSTPIP2Q9H939 334 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 MRPL44Q9H9J2 332 aaKnown RBP18.81■□□□□ 0.6
NUP50-202ENST00000396096 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
NUP50-202ENST00000396096 CASQ1P31415 396 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 GNG11P61952 73 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 STK4Q13043 487 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 UNC13DQ70J99 1090 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 LARP4BQ92615 738 aaKnown RBP18.8■□□□□ 0.6
NUP50-202ENST00000396096 KIFC2Q96AC6 838 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 LRRC27Q9C0I9 530 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 MAGEC2Q9UBF1 373 aaPredicted RBP18.8■□□□□ 0.6
NUP50-202ENST00000396096 SLC26A4O43511 780 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 CACNB3P54284 484 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 GLIPR1L2Q4G1C9 344 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 CC2D2BQ6DHV5 1058 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 TMEM179Q6ZVK1 233 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 FAM114A1Q8IWE2 563 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 RAD54LQ92698 747 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 WDR24Q96S15 920 aa18.8■□□□□ 0.6
NUP50-202ENST00000396096 DDX25Q9UHL0 483 aaKnown RBP18.8■□□□□ 0.6
NUP50-202ENST00000396096 ENTPD3O75355 529 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 SLURP2P0DP57 97 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 DNM2P50570 870 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 TCP10Q12799 353 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 ELF2Q15723 593 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 QRICH1Q2TAL8 776 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 KRT79Q5XKE5 535 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 SIAH1Q8IUQ4 282 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 CSGALNACT2Q8N6G5 542 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 GMCL1P1Q8NEA9 526 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 HAS1Q92839 578 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 CDK5RAP3Q96JB5 506 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 FEZ1Q99689 392 aa18.79■□□□□ 0.6
NUP50-202ENST00000396096 MYMKA6NI61 221 aa18.78■□□□□ 0.6
NUP50-202ENST00000396096 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
NUP50-202ENST00000396096 URI1O94763 535 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms