RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PPP4R1Q8TF05 950 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 PSMD1Q99460 953 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 ZDHHC9Q9Y397 364 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 ARHGAP42A6NI28 874 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 SLC8A3P57103 927 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 ANKRD35Q8N283 1001 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 TUBB6Q9BUF5 446 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 NHEJ1Q9H9Q4 299 aaPredicted RBP18.8■□□□□ 0.6
SIN3A-203ENST00000394949 THEGQ9P2T0 379 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 IVNS1ABPQ9Y6Y0 642 aa18.8■□□□□ 0.6
SIN3A-203ENST00000394949 IRX5P78411 483 aaPredicted RBP18.79■□□□□ 0.6
SIN3A-203ENST00000394949 ZKSCAN8Q15776 578 aaPredicted RBP18.79■□□□□ 0.6
SIN3A-203ENST00000394949 CMTR1Q8N1G2 835 aaKnown RBP18.79■□□□□ 0.6
SIN3A-203ENST00000394949 TGFBRAP1Q8WUH2 860 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 RAB20Q9NX57 234 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 USP17L12C9JPN9 530 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 USP17L21D6R901 530 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 LMNB2Q03252 620 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 HIBCHQ6NVY1 386 aaPredicted RBP18.79■□□□□ 0.6
SIN3A-203ENST00000394949 PCDHA12Q9UN75 941 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 IFNAR2P48551 515 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 SLFN12Q8IYM2 578 aa18.79■□□□□ 0.6
SIN3A-203ENST00000394949 HARSP12081 509 aaKnown RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 RFC1P35251 1148 aaPredicted RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 FLAD1Q8NFF5 587 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 FBXO41Q8TF61 875 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 CCT6BQ92526 530 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 MAGOHBQ96A72 148 aaKnown RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 BIN2Q9UBW5 565 aaPredicted RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 USP21Q9UK80 565 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 COL4A3BPQ9Y5P4 624 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 ATP7BP35670 1465 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 DHX9Q08211 1270 aaKnown RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 PNMA1Q8ND90 353 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 CHURC1Q8WUH1 139 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 HINFPQ9BQA5 517 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 FRMD3A2A2Y4 597 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 KCNQ3O43525 872 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 BAG2O95816 211 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 CCNE1P24864 410 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 CCDC144BQ3MJ40 725 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 ANKRD7Q92527 254 aa18.78■□□□□ 0.6
SIN3A-203ENST00000394949 TLR7Q9NYK1 1049 aaKnown RBP18.78■□□□□ 0.6
SIN3A-203ENST00000394949 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 NSMFQ6X4W1 530 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 RSAD2Q8WXG1 361 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 TEKT1Q969V4 418 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 PPP1R9AQ9ULJ8 1098 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 CA8P35219 290 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 SESN3P58005 492 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
SIN3A-203ENST00000394949 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 TPX2Q9ULW0 747 aaKnown RBP18.77■□□□□ 0.6
SIN3A-203ENST00000394949 NOP56O00567 594 aaKnown RBP18.77■□□□□ 0.6
SIN3A-203ENST00000394949 RESP18Q5W5W9 173 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 NOP53Q9NZM5 478 aaKnown RBP18.77■□□□□ 0.6
SIN3A-203ENST00000394949 SCOCQ9UIL1 159 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
SIN3A-203ENST00000394949 KDM6BO15054 1643 aa18.77■□□□□ 0.59
SIN3A-203ENST00000394949 SKIP12755 728 aa18.77■□□□□ 0.59
SIN3A-203ENST00000394949 FKBP3Q00688 224 aaKnown RBP18.77■□□□□ 0.59
SIN3A-203ENST00000394949 CCDC24Q8N4L8 307 aa18.77■□□□□ 0.59
SIN3A-203ENST00000394949 UHMK1Q8TAS1 419 aaKnown RBP18.77■□□□□ 0.59
SIN3A-203ENST00000394949 ATP8A1Q9Y2Q0 1164 aa18.77■□□□□ 0.59
SIN3A-203ENST00000394949 MYCLP12524 364 aaPredicted RBP18.76■□□□□ 0.59
SIN3A-203ENST00000394949 GEN1Q17RS7 908 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
SIN3A-203ENST00000394949 PCDHA13Q9Y5I0 950 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 SEPT2Q15019 361 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 TAF11Q15544 211 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 TAF12Q16514 161 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.76■□□□□ 0.59
SIN3A-203ENST00000394949 PSMD6Q15008 389 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 CCDC188H7C350 402 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 SH2B2O14492 632 aaPredicted RBP18.76■□□□□ 0.59
SIN3A-203ENST00000394949 CFBP00751 764 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 IFNB1P01574 187 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 CDAN1Q8IWY9 1227 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 SMYD4Q8IYR2 804 aaPredicted RBP18.76■□□□□ 0.59
SIN3A-203ENST00000394949 STK17AQ9UEE5 414 aa18.76■□□□□ 0.59
SIN3A-203ENST00000394949 MOCS3O95396 460 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 CYP2C19P33261 490 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 YWHAEP62258 255 aaKnown RBP18.75■□□□□ 0.59
SIN3A-203ENST00000394949 GTF2IP78347 998 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 RASA3Q14644 834 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 TCP11X2Q5H9J9 407 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
SIN3A-203ENST00000394949 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 NOVA2Q9UNW9 492 aaKnown RBP18.75■□□□□ 0.59
SIN3A-203ENST00000394949 CRCPO75575 148 aa18.75■□□□□ 0.59
SIN3A-203ENST00000394949 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
SIN3A-203ENST00000394949 LIFRP42702 1097 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms