RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NLRP5P59047 1200 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 ZNF513Q8N8E2 541 aaPredicted RBP21.35■■□□□ 1.01
CCDC50-202ENST00000392456 ACER1Q8TDN7 264 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 TNFRSF25Q93038 417 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 NUP88Q99567 741 aaPredicted RBP21.35■■□□□ 1.01
CCDC50-202ENST00000392456 RIOX1Q9H6W3 641 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 GOLGA6L4A6NEF3 574 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 STK38Q15208 465 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 PLA2G4DQ86XP0 818 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 GPC2Q8N158 579 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 LZTS2Q9BRK4 669 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 SRRTQ9BXP5 876 aaKnown RBP21.35■■□□□ 1.01
CCDC50-202ENST00000392456 DEFB129Q9H1M3 183 aa21.35■■□□□ 1.01
CCDC50-202ENST00000392456 KRT2P35908 639 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 PTPAQ15257 358 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 H7C1D1 291 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 STXBP3O00186 592 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 CCDC96Q2M329 555 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 ASPRV1Q53RT3 343 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 KIAA1755Q5JYT7 1200 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 RASGRP4Q8TDF6 673 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 GOLPH3LQ9H4A5 285 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 PCDHB6Q9Y5E3 794 aa21.34■■□□□ 1.01
CCDC50-202ENST00000392456 F5H6K3 240 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 SPTLC2O15270 562 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 CTAGE5O15320 804 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 TBC1D12O60347 775 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 NR1I2O75469 434 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 ZNF75DP51815 510 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 KLRC3Q07444 240 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 ANGEL2Q5VTE6 544 aaKnown RBP21.33■■□□□ 1.01
CCDC50-202ENST00000392456 SLFN13Q68D06 897 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 ADGRF4Q8IZF3 695 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 FAM200AQ8TCP9 573 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 BARHL2Q9NY43 387 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 ZBTB21Q9ULJ3 1066 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 FZD1Q9UP38 647 aa21.33■■□□□ 1.01
CCDC50-202ENST00000392456 MAP3K10Q02779 954 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 SLC39A14Q15043 492 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 NBPF12Q5TAG4 269 aaPredicted RBP21.33■■□□□ 1
CCDC50-202ENST00000392456 SPICE1Q8N0Z3 855 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 TATDN2Q93075 761 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 GLIS2Q9BZE0 524 aaPredicted RBP21.33■■□□□ 1
CCDC50-202ENST00000392456 JMJD4Q9H9V9 463 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 DACT1Q9NYF0 836 aa21.33■■□□□ 1
CCDC50-202ENST00000392456 ANKRD65E5RJM6 399 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 YEATS4O95619 227 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 CCDC192P0DO97 292 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 JAKMIP3Q5VZ66 844 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 RPS6KL1Q9Y6S9 549 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 PHF20L1A8MW92 1017 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 NDUFB10O96000 172 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 ERCC3P19447 782 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 SLC1A4P43007 532 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 TNNI2P48788 182 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 DLK2Q6UY11 383 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 KAT2BQ92831 832 aa21.32■■□□□ 1
CCDC50-202ENST00000392456 RRP36Q96EU6 259 aaKnown RBP21.32■■□□□ 1
CCDC50-202ENST00000392456 USP17L10C9JJH3 530 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 PPP1R11O60927 126 aaPredicted RBP21.31■■□□□ 1
CCDC50-202ENST00000392456 HNRNPH1P31943 449 aaKnown RBP21.31■■□□□ 1
CCDC50-202ENST00000392456 CAP2P40123 477 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 USP8P40818 1118 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 C9orf131Q5VYM1 1079 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 A1CFQ9NQ94 594 aaKnown RBP21.31■■□□□ 1
CCDC50-202ENST00000392456 KCND1Q9NSA2 647 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
CCDC50-202ENST00000392456 NEBLO76041 1014 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 SMARCA1P28370 1054 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 CAMK4Q16566 473 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 CCDC144BQ3MJ40 725 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 CCAR1Q8IX12 1150 aaKnown RBP21.31■■□□□ 1
CCDC50-202ENST00000392456 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 COA7Q96BR5 231 aa21.31■■□□□ 1
CCDC50-202ENST00000392456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.31■■□□□ 16e-9■□□□□ 8.8
CCDC50-202ENST00000392456 KCNV1Q6PIU1 500 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 PIK3AP1Q6ZUJ8 805 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 GIMAP7Q8NHV1 300 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 KCNG4Q8TDN1 519 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 CLIC6Q96NY7 704 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 SLC24A3Q9HC58 644 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 TNFAIP1Q13829 316 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 LRRC8AQ8IWT6 810 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 CCDC34Q96HJ3 373 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 SH3GLB2Q9NR46 395 aa21.3■■□□□ 1
CCDC50-202ENST00000392456 M0R2N6 131 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 GRIN1Q05586 938 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 RILPL1Q5EBL4 403 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 GPATCH4Q5T3I0 446 aaKnown RBP21.29■■□□□ 1
CCDC50-202ENST00000392456 BLIDQ8IZY5 108 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 GGA3Q9NZ52 723 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 A0A1B0GVL5 298 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 NEMFO60524 1076 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 ELF1P32519 619 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 SNAP25P60880 206 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 CCAR2Q8N163 923 aaKnown RBP21.29■■□□□ 1
CCDC50-202ENST00000392456 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
CCDC50-202ENST00000392456 PCDHA4Q9UN74 947 aa21.29■■□□□ 1
CCDC50-202ENST00000392456 IPO7O95373 1038 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms