RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 KRT5P13647 590 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 RPS8P62241 208 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 NEDD9Q14511 834 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 GKAP1Q5VSY0 366 aaPredicted RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 USPL1Q5W0Q7 1092 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 NCAPH2Q6IBW4 605 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 H2AFVQ71UI9 128 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 GDAP1L1Q96MZ0 367 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 PANX2Q96RD6 677 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 GGA1Q9UJY5 639 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 JAG2Q9Y219 1238 aa9.24□□□□□ -0.93
VPS36-201ENST00000378060 BZW2Q9Y6E2 419 aaKnown RBP9.24□□□□□ -0.93
VPS36-201ENST00000378060 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 LARGE1O95461 756 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 PCK1P35558 622 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 LIFRP42702 1097 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 CLNS1AP54105 237 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 AK8Q96MA6 479 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 TUBGCP2Q9BSJ2 902 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 TLR7Q9NYK1 1049 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 COMMD10Q9Y6G5 202 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 CICQ96RK0 1608 aaPredicted RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 LSM14BQ9BX40 385 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 MAK16Q9BXY0 300 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 MRPL44Q9H9J2 332 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 FAM169AQ9Y6X4 670 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 KRIT1O00522 736 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 KCNK3O14649 394 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 BACH1O14867 736 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 GCNT3O95395 438 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 MYCT1Q8N699 235 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 RABEP2Q9H5N1 569 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 MAP2K2P36507 400 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 NT5C2P49902 561 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 NCBP1Q09161 790 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 FAM47AQ5JRC9 791 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 TRAPPC3LQ5T215 181 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 LGSNQ5TDP6 509 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 HHATQ5VTY9 493 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 CCDC170Q8IYT3 715 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 PPANQ9NQ55 473 aaKnown RBP9.23□□□□□ -0.93
VPS36-201ENST00000378060 PCDHA12Q9UN75 941 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 CAPN7Q9Y6W3 813 aa9.23□□□□□ -0.93
VPS36-201ENST00000378060 CCDC169A6NNP5 214 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 IL6STP40189 918 aaPredicted RBP9.22□□□□□ -0.93
VPS36-201ENST00000378060 EPHB4P54760 987 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 FAM26FQ5R3K3 315 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 PCDHB13Q9Y5F0 798 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 KLRF2D3W0D1 207 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 SEMA3EO15041 775 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 SASH1O94885 1247 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 CLCN6P51797 869 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
VPS36-201ENST00000378060 FAM204AQ9H8W3 233 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 AGTPBP1Q9UPW5 1226 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 SRPRBQ9Y5M8 271 aaKnown RBP9.22□□□□□ -0.93
VPS36-201ENST00000378060 UBN2Q6ZU65 1347 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 CCDC160A6NGH7 325 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 MMP1P03956 469 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 BAG6P46379 1132 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 GUCY2FP51841 1108 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 MAP7D1Q3KQU3 841 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 CFAP157Q5JU67 520 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 U2AF1L4Q8WU68 220 aaKnown RBP9.22□□□□□ -0.93
VPS36-201ENST00000378060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS36-201ENST00000378060 MCUR1Q96AQ8 359 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 PARD6BQ9BYG5 372 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 TBC1D7Q9P0N9 293 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 BAIAP2L1Q9UHR4 511 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 ANAPC4Q9UJX5 808 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 MAN1B1Q9UKM7 699 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 ZBTB21Q9ULJ3 1066 aa9.22□□□□□ -0.93
VPS36-201ENST00000378060 SLC8A1P32418 973 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 ADD2P35612 726 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 ZNF658Q5TYW1 1059 aaPredicted RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 CCDC62Q6P9F0 684 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 GPBP1Q86WP2 473 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 P3H4Q92791 437 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 MAP3K15Q6ZN16 1313 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 N4BP1O75113 896 aaKnown RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 RPS6KA4O75676 772 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 TECP42680 631 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 RBL2Q08999 1139 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 COL23A1Q86Y22 540 aaPredicted RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 MAPKAPK5Q8IW41 473 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 EFCAB13Q8IY85 973 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 CMTR1Q8N1G2 835 aaKnown RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 TGFBRAP1Q8WUH2 860 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 AKT1S1Q96B36 256 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 CNOT6LQ96LI5 555 aaKnown RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 OSBPL5Q9H0X9 879 aaPredicted RBP9.21□□□□□ -0.93
VPS36-201ENST00000378060 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.93
VPS36-201ENST00000378060 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
VPS36-201ENST00000378060 CHMP2AO43633 222 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms