RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
BEST1-201ENST00000378043 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
BEST1-201ENST00000378043 IL1R1P14778 569 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 ZSCAN29Q8IWY8 852 aaPredicted RBP12.23□□□□□ -0.45
BEST1-201ENST00000378043 MTMR9Q96QG7 549 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 UFL1O94874 794 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 GRB10Q13322 594 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 NGLY1Q96IV0 654 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
BEST1-201ENST00000378043 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 ATP1A1P05023 1023 aaKnown RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 TRIM21P19474 475 aaKnown RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 GYS2P54840 703 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 TUBB4BP68371 445 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 CCDC122Q5T0U0 273 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 ZNF662Q6ZS27 426 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 REXO1Q8N1G1 1221 aaKnown RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 FAM163AQ96GL9 167 aaPredicted RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 MYH10P35580 1976 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 BICDL2A1A5D9 508 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 PDHBP11177 359 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 TXKP42681 527 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 CRY2Q49AN0 593 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 MFSD14BQ5SR56 506 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 FAM196AQ6ZSG2 479 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 PNMA5Q96PV4 448 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
BEST1-201ENST00000378043 DUSP10Q9Y6W6 482 aa12.22□□□□□ -0.45
BEST1-201ENST00000378043 MYMKA6NI61 221 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 SLC37A4O43826 429 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 ZBED6P86452 979 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 MCM6Q14566 821 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 PAPD7Q5XG87 772 aaKnown RBP12.21□□□□□ -0.45
BEST1-201ENST00000378043 CENPPQ6IPU0 288 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 ZBTB9Q96C00 473 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 ERGIC2Q96RQ1 377 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 NUP58Q9BVL2 599 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 GAKO14976 1311 aa12.21□□□□□ -0.45
BEST1-201ENST00000378043 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
BEST1-201ENST00000378043 ZNF263O14978 683 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 TSR1Q2NL82 804 aaKnown RBP12.21□□□□□ -0.46
BEST1-201ENST00000378043 SOGA3Q5TF21 947 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 CERKQ8TCT0 537 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 COA7Q96BR5 231 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 MMS19Q96T76 1030 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.46
BEST1-201ENST00000378043 PDE11AQ9HCR9 933 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 POLLQ9UGP5 575 aa12.21□□□□□ -0.46
BEST1-201ENST00000378043 EPHB6O15197 1021 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 TDP2O95551 362 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 CYP27A1Q02318 531 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 HDXQ7Z353 690 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 NEK11Q8NG66 645 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 RPGRQ92834 1020 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 PLEKP08567 350 aaPredicted RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 PLCG2P16885 1265 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
BEST1-201ENST00000378043 KRT83P78385 493 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 AMPD3Q01432 767 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 MSL3Q8N5Y2 521 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 JAKMIP2Q96AA8 810 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
BEST1-201ENST00000378043 LRRC4BQ9NT99 713 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 MTMR4Q9NYA4 1195 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 ADAM21Q9UKJ8 722 aa12.2□□□□□ -0.46
BEST1-201ENST00000378043 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 POTEMA6NI47 508 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 ATP2B4P23634 1241 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 GABPAQ06546 454 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 ORC2Q13416 577 aaPredicted RBP12.19□□□□□ -0.46
BEST1-201ENST00000378043 CALCRLQ16602 461 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 WDR93Q6P2C0 686 aa12.19□□□□□ -0.46
BEST1-201ENST00000378043 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms