RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 MIS12Q9H081 205 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 CDC37Q16543 378 aaPredicted RBP21.67■■□□□ 1.06
PCDH8-202ENST00000377942 BARGINQ6ZT62 677 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 RIC8AQ9NPQ8 531 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 SUGT1Q9Y2Z0 365 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 SLC7A3Q8WY07 619 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 COA7Q96BR5 231 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 UTP11Q9Y3A2 253 aaKnown RBP21.67■■□□□ 1.06
PCDH8-202ENST00000377942 SEPT2Q15019 361 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 ZNF827Q17R98 1081 aa21.67■■□□□ 1.06
PCDH8-202ENST00000377942 ARL6IP4Q66PJ3 421 aaKnown RBP21.67■■□□□ 1.06
PCDH8-202ENST00000377942 LRRIQ4A6NIV6 560 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 ECE2O60344 883 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 FANCLQ9NW38 375 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 MROH7-TTC4A0A0A0MT08 1334 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 MIS18BP1Q6P0N0 1132 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 IFT20Q8IY31 132 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 CEP104O60308 925 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 ATP5DP30049 168 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 CFAP221Q4G0U5 840 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 E7EVH7 732 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 TMTC3Q6ZXV5 915 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 CROCCP2Q86T23 111 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 GPT2Q8TD30 523 aa21.66■■□□□ 1.06
PCDH8-202ENST00000377942 SRPRBQ9Y5M8 271 aaKnown RBP21.66■■□□□ 1.06
PCDH8-202ENST00000377942 TLDC2A0PJX2 215 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 DIP2AQ14689 1571 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 GABPB2Q8TAK5 448 aaPredicted RBP21.65■■□□□ 1.06
PCDH8-202ENST00000377942 FEZ2Q9UHY8 353 aaPredicted RBP21.65■■□□□ 1.06
PCDH8-202ENST00000377942 KIDINS220Q9ULH0 1771 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 AP3B2Q13367 1082 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 RPGRIP1Q96KN7 1286 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 CD163L1Q9NR16 1453 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 PALM3A6NDB9 673 aaPredicted RBP21.65■■□□□ 1.06
PCDH8-202ENST00000377942 NR5A1Q13285 461 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 CCDC63Q8NA47 563 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 PLCD4Q9BRC7 762 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 MYO3AQ8NEV4 1616 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 STK36Q9NRP7 1315 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 NRXN1Q9ULB1 1477 aa21.65■■□□□ 1.06
PCDH8-202ENST00000377942 ATRIPQ8WXE1 791 aa21.64■■□□□ 1.06
PCDH8-202ENST00000377942 TMEM191BP0C7N4 346 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 EEF1GP26641 437 aaKnown RBP21.64■■□□□ 1.05
PCDH8-202ENST00000377942 CNGA1P29973 690 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 MIGA2Q7L4E1 593 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 PSMD1Q99460 953 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 DCP1AQ9NPI6 582 aaPredicted RBP21.64■■□□□ 1.05
PCDH8-202ENST00000377942 UTYO14607 1347 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 LRMPQ12912 555 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 TRIM58Q8NG06 486 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 CRAMP1Q96RY5 1269 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 TECPR2O15040 1411 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 IKBKBO14920 756 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 RESTQ13127 1097 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 SF3B3Q15393 1217 aaKnown RBP21.64■■□□□ 1.05
PCDH8-202ENST00000377942 RETREG2Q8NC44 543 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 U2AF1L4Q8WU68 220 aaKnown RBP21.64■■□□□ 1.05
PCDH8-202ENST00000377942 AMFRQ9UKV5 643 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 PNMA3Q9UL41 463 aa21.64■■□□□ 1.05
PCDH8-202ENST00000377942 CD2BP2O95400 341 aaKnown RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 MRPS9P82933 396 aaKnown RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 CCDC125Q86Z20 511 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 SELENOSQ9BQE4 189 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 NCOA3Q9Y6Q9 1424 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 XPOTO43592 962 aaKnown RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 GH2P01242 217 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 IVLP07476 585 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 AP5M1Q9H0R1 490 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 SEPT9Q9UHD8 586 aaPredicted RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 FAM184BQ9ULE4 1060 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 RIPOR2Q9Y4F9 1068 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 ADKP55263 362 aaKnown RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 HAUS2Q9NVX0 235 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 UBLCP1Q8WVY7 318 aaPredicted RBP21.63■■□□□ 1.05
PCDH8-202ENST00000377942 STIM2Q9P246 746 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 USTQ9Y2C2 406 aa21.63■■□□□ 1.05
PCDH8-202ENST00000377942 COPB1P53618 953 aaKnown RBP21.62■■□□□ 1.05
PCDH8-202ENST00000377942 ZNF34Q8IZ26 560 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 POMGNT1Q8WZA1 660 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 LPXNO60711 386 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 RSPH3Q86UC2 560 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 ANKS4BQ8N8V4 417 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 BPIFB4P59827 614 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 FAM84BQ96KN1 310 aaPredicted RBP21.62■■□□□ 1.05
PCDH8-202ENST00000377942 PSMD2Q13200 908 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 PPP2R5EQ16537 467 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 GJA10Q969M2 543 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 SLC10A4Q96EP9 437 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 ACCSQ96QU6 501 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 TMEM206Q9H813 350 aa21.62■■□□□ 1.05
PCDH8-202ENST00000377942 SNAP23O00161 211 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 UBXN2AP68543 259 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 TDRD7Q8NHU6 1098 aaKnown RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 P2RX5Q93086 422 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 CARD6Q9BX69 1037 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 ZNF341Q9BYN7 854 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 ANO3Q9BYT9 981 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 ALDH3A1P30838 453 aa21.61■■□□□ 1.05
PCDH8-202ENST00000377942 ZNF658Q5TYW1 1059 aaPredicted RBP21.61■■□□□ 1.05
PCDH8-202ENST00000377942 TBC1D10CQ8IV04 446 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms