RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 COL4A5P29400 1685 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 TRIM49BA6NDI0 452 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 STX10O60499 249 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 PMS1P54277 932 aaKnown RBP29.53■■■□□ 2.32
CUL4A-202ENST00000375440 SPAG1Q07617 926 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 PDIA5Q14554 519 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 TMEM266Q2M3C6 531 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 GRIPAP1Q4V328 841 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 TCP11X2Q5H9J9 407 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 RSBN1LQ6PCB5 846 aaPredicted RBP29.53■■■□□ 2.32
CUL4A-202ENST00000375440 PNMA5Q96PV4 448 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 GH2P01242 217 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 CCT6AP40227 531 aaKnown RBP29.53■■■□□ 2.32
CUL4A-202ENST00000375440 IRF2BP1Q8IU81 584 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 RTKN2Q8IZC4 609 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 PSMD1Q99460 953 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 NUP88Q99567 741 aaPredicted RBP29.53■■■□□ 2.32
CUL4A-202ENST00000375440 BLOC1S4Q9NUP1 217 aa29.53■■■□□ 2.32
CUL4A-202ENST00000375440 SPDYE2BA6NHP3 402 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 POTEMA6NI47 508 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 KCNJ18B7U540 433 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 H7C1D1 291 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 NDUFB10O96000 172 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 SPDYE6P0CI01 402 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 KCNJ12Q14500 433 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 GMCL1Q96IK5 515 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 GMLQ99445 158 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 DDX25Q9UHL0 483 aaKnown RBP29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L15C9J2P7 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L13C9JLJ4 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L11C9JVI0 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L18D6R9N7 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L22D6RA61 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L17D6RBQ6 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L19D6RCP7 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L20D6RJB6 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 RAD17O75943 681 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 KCNA3P22001 575 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L24Q0WX57 530 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 USP17L6PQ6QN14 398 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 HAS1Q92839 578 aa29.52■■■□□ 2.32
CUL4A-202ENST00000375440 CCP110O43303 1012 aa29.51■■■□□ 2.31
CUL4A-202ENST00000375440 RBM26Q5T8P6 1007 aaKnown RBP29.51■■■□□ 2.31
CUL4A-202ENST00000375440 GLT8D2Q9H1C3 349 aa29.51■■■□□ 2.31
CUL4A-202ENST00000375440 AKR1B15C9JRZ8 316 aaPredicted RBP29.5■■■□□ 2.31
CUL4A-202ENST00000375440 PSMD14O00487 310 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 VIL1P09327 827 aaKnown RBP29.5■■■□□ 2.31
CUL4A-202ENST00000375440 COPB1P53618 953 aaKnown RBP29.5■■■□□ 2.31
CUL4A-202ENST00000375440 ASIC1P78348 528 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 RBL2Q08999 1139 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 KIF18AQ8NI77 898 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 RAB34Q9BZG1 259 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 STK17AQ9UEE5 414 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 AMPD3Q01432 767 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 STIM1Q13586 685 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 REXO1L1PQ8IX06 675 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 ZNF710Q8N1W2 664 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 NUDT12Q9BQG2 462 aa29.5■■■□□ 2.31
CUL4A-202ENST00000375440 ZNF277Q9NRM2 450 aaPredicted RBP29.5■■■□□ 2.31
CUL4A-202ENST00000375440 TCP10L2B9ZVM9 353 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 PSMA7O14818 248 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 N4BP3O15049 544 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 GCFC2P16383 781 aaKnown RBP29.49■■■□□ 2.31
CUL4A-202ENST00000375440 PANX2Q96RD6 677 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 VPS16Q9H269 839 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 TAB2Q9NYJ8 693 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 ITIH6Q6UXX5 1313 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 PDE4DQ08499 809 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 TTI2Q6NXR4 508 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 LARGE2Q8N3Y3 721 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 EXOC1Q9NV70 894 aa29.49■■■□□ 2.31
CUL4A-202ENST00000375440 A0A1W2PRG0 241 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 CLRN2A0PK11 232 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 DPEP1P16444 411 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 PPFIBP1Q86W92 1011 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 SNAP25P60880 206 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 STK4Q13043 487 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 SV2BQ7L1I2 683 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 DHTKD1Q96HY7 919 aaPredicted RBP29.48■■■□□ 2.31
CUL4A-202ENST00000375440 TMOD2Q9NZR1 351 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 HERC5Q9UII4 1024 aaKnown RBP29.48■■■□□ 2.31
CUL4A-202ENST00000375440 PPP2R2CQ9Y2T4 447 aa29.48■■■□□ 2.31
CUL4A-202ENST00000375440 MEIS2O14770 477 aa29.47■■■□□ 2.31
CUL4A-202ENST00000375440 MCM6Q14566 821 aa29.47■■■□□ 2.31
CUL4A-202ENST00000375440 ANKRD20A12PQ8NF67 263 aa29.47■■■□□ 2.31
CUL4A-202ENST00000375440 GJA10Q969M2 543 aa29.47■■■□□ 2.31
CUL4A-202ENST00000375440 CCDC47Q96A33 483 aaKnown RBP29.47■■■□□ 2.31
CUL4A-202ENST00000375440 ZNF70Q9UC06 446 aaPredicted RBP29.47■■■□□ 2.31
CUL4A-202ENST00000375440 SNX29Q8TEQ0 813 aa29.47■■■□□ 2.31
CUL4A-202ENST00000375440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.47■■■□□ 2.313e-9■□□□□ 8.7
CUL4A-202ENST00000375440 MYMKA6NI61 221 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 RRP9O43818 475 aaKnown RBP29.46■■■□□ 2.31
CUL4A-202ENST00000375440 GYPCP04921 128 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 FCER1AP12319 257 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 KRT79Q5XKE5 535 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 SYT10Q6XYQ8 523 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 DEFB132Q7Z7B7 95 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 CPLX3Q8WVH0 158 aa29.46■■■□□ 2.31
CUL4A-202ENST00000375440 LARP4BQ92615 738 aaKnown RBP29.46■■■□□ 2.31
CUL4A-202ENST00000375440 ANO3Q9BYT9 981 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms