RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
NELFE-201ENST00000375425 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
NELFE-201ENST00000375425 TIMP1P01033 207 aa16.66■□□□□ 0.26
NELFE-201ENST00000375425 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
NELFE-201ENST00000375425 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
NELFE-201ENST00000375425 USH1GQ495M9 461 aa16.66■□□□□ 0.26
NELFE-201ENST00000375425 TBX21Q9UL17 535 aa16.66■□□□□ 0.26
NELFE-201ENST00000375425 TNKSO95271 1327 aa16.66■□□□□ 0.26
NELFE-201ENST00000375425 EYSQ5T1H1 3165 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 LTBP2Q14767 1821 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 ZEB2O60315 1214 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 CABYRO75952 493 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 FPGSQ05932 587 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 FAM109BQ6ICB4 259 aaPredicted RBP16.65■□□□□ 0.26
NELFE-201ENST00000375425 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 WDR11Q9BZH6 1224 aa16.65■□□□□ 0.26
NELFE-201ENST00000375425 CHMLP26374 656 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 FAM126BQ8IXS8 530 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 SLC17A8Q8NDX2 589 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 STXBP5LQ9Y2K9 1186 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
NELFE-201ENST00000375425 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 RBM47A0AV96 593 aaKnown RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 TLR3O15455 904 aaKnown RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 CD4P01730 458 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 ITGA7Q13683 1181 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 IFIT1BQ5T764 474 aaKnown RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 MFSD5Q6N075 450 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 SLC43A3Q8NBI5 491 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 DNERQ8NFT8 737 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
NELFE-201ENST00000375425 RAD50Q92878 1312 aa16.63■□□□□ 0.25
NELFE-201ENST00000375425 SMAD3P84022 425 aaKnown RBP16.62■□□□□ 0.25
NELFE-201ENST00000375425 PTH1RQ03431 593 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 PDE4DQ08499 809 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 MPHOSPH6Q99547 160 aaKnown RBP16.62■□□□□ 0.25
NELFE-201ENST00000375425 DHX16O60231 1041 aaKnown RBP16.62■□□□□ 0.25
NELFE-201ENST00000375425 EDNRBP24530 442 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 PSMC6P62333 389 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 TRDNQ13061 729 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 SEC23AQ15436 765 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 JMJD4Q9H9V9 463 aa16.62■□□□□ 0.25
NELFE-201ENST00000375425 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
NELFE-201ENST00000375425 ABCB11O95342 1321 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 B4DLN1 442 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 CYP21A2P08686 494 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 CSF2RAP15509 400 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 MRPL12P52815 198 aaKnown RBP16.61■□□□□ 0.25
NELFE-201ENST00000375425 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 TMEM199Q8N511 208 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 SEZ6LQ9BYH1 1024 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 MAF1Q9H063 256 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
NELFE-201ENST00000375425 CYP2C18P33260 490 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 CPT1AP50416 773 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 PPIGQ13427 754 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■■■□ 22.6
NELFE-201ENST00000375425 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 MCF2L2Q86YR7 1114 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 OR6J1Q8NGC5 347 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 SYTL5Q8TDW5 730 aaPredicted RBP16.6■□□□□ 0.25
NELFE-201ENST00000375425 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 TAAR1Q96RJ0 339 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■□□□ 14.2
NELFE-201ENST00000375425 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
NELFE-201ENST00000375425 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
NELFE-201ENST00000375425 LCTP09848 1927 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 PRUNE2Q8WUY3 3088 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 KLRF2D3W0D1 207 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 NKRFO15226 690 aaKnown RBP eCLIP16.59■□□□□ 0.25
NELFE-201ENST00000375425 SGSM2O43147 1006 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 B4GALT4O60513 344 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
NELFE-201ENST00000375425 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 TMEM240Q5SV17 173 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 COPS5Q92905 334 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 GPHNQ9NQX3 736 aaPredicted RBP16.59■□□□□ 0.25
NELFE-201ENST00000375425 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 TAF6LQ9Y6J9 622 aa16.59■□□□□ 0.25
NELFE-201ENST00000375425 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 PALM3A6NDB9 673 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 IFIT3O14879 490 aaKnown RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 MYL3P08590 195 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms