RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KRT222Q8N1A0 295 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 OGFOD1Q8N543 542 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 RETREG2Q8NC44 543 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 SLC44A5Q8NCS7 719 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 NLGN2Q8NFZ4 835 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 ARID3AQ99856 593 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 C7orf25Q9BPX7 421 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 TEX33O43247 280 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 SLC26A4O43511 780 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 ATP8B1O43520 1251 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 CASP1P29466 404 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 PRCPP42785 496 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 DNM2P50570 870 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 CBX1P83916 185 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 UBXN1Q04323 297 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 TNIP1Q15025 636 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 KMT5BQ4FZB7 885 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 ARHGAP29Q52LW3 1261 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 CDC42EP5Q6NZY7 148 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 STAMQ92783 540 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 ZNHIT6Q9NWK9 470 aaKnown RBP13.7□□□□□ -0.22
UBR4-203ENST00000375225 ADGRG1Q9Y653 693 aa13.7□□□□□ -0.22
UBR4-203ENST00000375225 TTLL1O95922 423 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CASP14P31944 242 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MMP14P50281 582 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 FAM193AP78312 1265 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MAP3K9P80192 1104 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 GABPB1Q06547 395 aaPredicted RBP13.69□□□□□ -0.22
UBR4-203ENST00000375225 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CALCRLQ16602 461 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CIAPIN1Q6FI81 312 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TMCO3Q6UWJ1 677 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
UBR4-203ENST00000375225 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 VPS16Q9H269 839 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 LGALS16A8MUM7 142 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TADA3O75528 432 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
UBR4-203ENST00000375225 GOLGA8HP0CJ92 632 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 PDHBP11177 359 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 H2AFXP16104 143 aaPredicted RBP13.69□□□□□ -0.22
UBR4-203ENST00000375225 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
UBR4-203ENST00000375225 PLCG1P19174 1290 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CCNE1P24864 410 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.229e-10■■□□□ 13.7
UBR4-203ENST00000375225 ASIC1P78348 528 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 PPP2R3AQ06190 1150 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 USP17L2Q6R6M4 530 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 CPLX3Q8WVH0 158 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MTRQ99707 1265 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MTMR4Q9NYA4 1195 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TAB2Q9NYJ8 693 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 GDAQ9Y2T3 454 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 MRFAP1Q9Y605 127 aa13.69□□□□□ -0.22
UBR4-203ENST00000375225 PNMA6FA0A0J9YX94 578 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 CTAGE9A4FU28 777 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 GYPCP04921 128 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 TUBBP07437 444 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
UBR4-203ENST00000375225 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
UBR4-203ENST00000375225 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
UBR4-203ENST00000375225 PDE4DQ08499 809 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 PDIA5Q14554 519 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 SEPT2Q15019 361 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 ERCC6LQ2NKX8 1250 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 FKBP15Q5T1M5 1219 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 UTP14CQ5TAP6 766 aaKnown RBP13.68□□□□□ -0.22
UBR4-203ENST00000375225 FBXO38Q6PIJ6 1188 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 OR8K1Q8NGG5 319 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 TBCKQ8TEA7 893 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 P2RX5Q93086 422 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 PIGSQ96S52 555 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
UBR4-203ENST00000375225 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms