RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 USP17L17D6RBQ6 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L19D6RCP7 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L20D6RJB6 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L24Q0WX57 530 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 USP17L6PQ6QN14 398 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 APTXQ7Z2E3 356 aaKnown RBP20.12■□□□□ 0.81
CTSA-204ENST00000372484 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 FAM151AQ8WW52 585 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 DDX25Q9UHL0 483 aaKnown RBP20.12■□□□□ 0.81
CTSA-204ENST00000372484 ZNRF3Q9ULT6 936 aa20.12■□□□□ 0.81
CTSA-204ENST00000372484 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 KLRC4O43908 158 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 KCNJ6P48051 423 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 TBX2Q13207 712 aaPredicted RBP20.11■□□□□ 0.81
CTSA-204ENST00000372484 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
CTSA-204ENST00000372484 RHOBTB3O94955 611 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 GOLGA8FQ08AF8 430 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 GOLGA8DPQ0D2H9 430 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 PDIA5Q14554 519 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 E4F1Q66K89 784 aaPredicted RBP20.11■□□□□ 0.81
CTSA-204ENST00000372484 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
CTSA-204ENST00000372484 ADD3Q9UEY8 706 aaKnown RBP20.11■□□□□ 0.81
CTSA-204ENST00000372484 A0A1W2PRG0 241 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 BMP3P12645 472 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 GCFC2P16383 781 aaKnown RBP20.1■□□□□ 0.81
CTSA-204ENST00000372484 AMPD3Q01432 767 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 PTPN14Q15678 1187 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 SPDYE2Q495Y8 402 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 FILIP1LQ4L180 1135 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 ADSSL1Q8N142 457 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 AMNQ9BXJ7 453 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 TRIM9Q9C026 710 aa20.1■□□□□ 0.81
CTSA-204ENST00000372484 POTEMA6NI47 508 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 SNAP25P60880 206 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 STIM1Q13586 685 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 SYDE2Q5VT97 1194 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 CCDC47Q96A33 483 aaKnown RBP20.09■□□□□ 0.81
CTSA-204ENST00000372484 CDK5RAP3Q96JB5 506 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 CNTNAP1P78357 1384 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 TEX33O43247 280 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 MARCH6O60337 910 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 NYAP1Q6ZVC0 841 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 GIMAP8Q8ND71 665 aaPredicted RBP20.09■□□□□ 0.81
CTSA-204ENST00000372484 NAP1L4Q99733 375 aaKnown RBP20.09■□□□□ 0.81
CTSA-204ENST00000372484 C7orf25Q9BPX7 421 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
CTSA-204ENST00000372484 ASIC1P78348 528 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 GRB10Q13322 594 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 CEP135Q66GS9 1140 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 FBXO11Q86XK2 927 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 ARHGEF10LQ9HCE6 1279 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 SYNPO2Q9UMS6 1093 aa20.08■□□□□ 0.81
CTSA-204ENST00000372484 PSDA5PKW4 1024 aaPredicted RBP20.08■□□□□ 0.8
CTSA-204ENST00000372484 DYNC1I1O14576 645 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 SPAG1Q07617 926 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 USH1GQ495M9 461 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 KRT79Q5XKE5 535 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 SV2BQ7L1I2 683 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 HAS1Q92839 578 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 ANO3Q9BYT9 981 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 EXOC1Q9NV70 894 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 STK17AQ9UEE5 414 aa20.08■□□□□ 0.8
CTSA-204ENST00000372484 MEIS2O14770 477 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 PSMA7O14818 248 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 ECE1P42892 770 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 KRT31Q15323 416 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 ANKRD20A12PQ8NF67 263 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 SNX29Q8TEQ0 813 aa20.07■□□□□ 0.8
CTSA-204ENST00000372484 H7C1D1 291 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 RIOK3O14730 519 aaKnown RBP20.06■□□□□ 0.8
CTSA-204ENST00000372484 CCT6AP40227 531 aaKnown RBP20.06■□□□□ 0.8
CTSA-204ENST00000372484 USP11P51784 963 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 ADKP55263 362 aaKnown RBP20.06■□□□□ 0.8
CTSA-204ENST00000372484 CXCL9Q07325 125 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 PDE4DQ08499 809 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 FKBP1CQ5VVH2 108 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 BTNL9Q6UXG8 535 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 CREBRFQ8IUR6 639 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 TC2NQ8N9U0 490 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 ZNF592Q92610 1267 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 PPP1R13BQ96KQ4 1090 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 PNMA5Q96PV4 448 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 TMEM39BQ9GZU3 492 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 BLOC1S4Q9NUP1 217 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 LIMA1Q9UHB6 759 aaKnown RBP20.06■□□□□ 0.8
CTSA-204ENST00000372484 PCDHA12Q9UN75 941 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 PAXBP1Q9Y5B6 917 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 TRIM49BA6NDI0 452 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 KCNJ18B7U540 433 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 ZBTB7AO95365 584 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 TGFB2P61812 414 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 AP3B2Q13367 1082 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 KCNJ12Q14500 433 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 TCP11X2Q5H9J9 407 aa20.06■□□□□ 0.8
CTSA-204ENST00000372484 MTMR14Q8NCE2 650 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms