RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 AFMP43652 599 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 AP3B2Q13367 1082 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 CALCRLQ16602 461 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 IGSF22Q8N9C0 903 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 IQUBQ8NA54 791 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 TBC1D5Q92609 795 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 HOOK2Q96ED9 719 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 BPIFA3Q9BQP9 254 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 CCSER1Q9C0I3 900 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 HOOK1Q9UJC3 728 aaKnown RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 RLFQ13129 1914 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 ZNF536O15090 1300 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 VCAM1P19320 739 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 LMOD1P29536 600 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 HOXA13P31271 388 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 SPP2Q13103 211 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 AOPEPQ8N6M6 819 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 STAMQ92783 540 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 HAS1Q92839 578 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 MMTAG2Q9BU76 263 aaKnown RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 WDR18Q9BV38 432 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 DDX25Q9UHL0 483 aaKnown RBP15.6■□□□□ 0.09
PTPRF-202ENST00000372405 OTOFQ9HC10 1997 aa15.6■□□□□ 0.09
PTPRF-202ENST00000372405 PIK3CDO00329 1044 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 TXKP42681 527 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 PLCB2Q00722 1185 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 DPYDQ12882 1025 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 GJA10Q969M2 543 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 AK8Q96MA6 479 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 MBOAT7Q96N66 472 aa15.59■□□□□ 0.09
PTPRF-202ENST00000372405 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.09
PTPRF-202ENST00000372405 USP11P51784 963 aa15.58■□□□□ 0.09
PTPRF-202ENST00000372405 MORC3Q14149 939 aa15.58■□□□□ 0.09
PTPRF-202ENST00000372405 NCAPHQ15003 741 aa15.58■□□□□ 0.09
PTPRF-202ENST00000372405 SMARCE1Q969G3 411 aa15.58■□□□□ 0.09
PTPRF-202ENST00000372405 SLF1Q9BQI6 1058 aa15.58■□□□□ 0.09
PTPRF-202ENST00000372405 NAT10Q9H0A0 1025 aaKnown RBP15.58■□□□□ 0.09
PTPRF-202ENST00000372405 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 CYP3A7-CYP3A51PA0A087WV96 503 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 ADM5C9JUS6 153 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
PTPRF-202ENST00000372405 CYP3A7P24462 503 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 TXLNAP40222 546 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 UBA7P41226 1012 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 BACE1P56817 501 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 ARHGAP4P98171 946 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 PRPF38AQ8NAV1 312 aaKnown RBP15.58■□□□□ 0.08
PTPRF-202ENST00000372405 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.58■□□□□ 0.08
PTPRF-202ENST00000372405 AGBL1Q96MI9 1066 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 PLIN2Q99541 437 aa15.58■□□□□ 0.08
PTPRF-202ENST00000372405 PYM1Q9BRP8 204 aaKnown RBP15.58■□□□□ 0.08
PTPRF-202ENST00000372405 USP2O75604 605 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-202ENST00000372405 SREBF1P36956 1147 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 STAT6P42226 847 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 PRKG1Q13976 671 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 SUPT20HL1Q3ZLR7 823 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 CABP7Q86V35 215 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 ZNF280CQ8ND82 737 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 L3MBTL3Q96JM7 780 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-202ENST00000372405 PICK1Q9NRD5 415 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 ZHX2Q9Y6X8 837 aa15.57■□□□□ 0.08
PTPRF-202ENST00000372405 COL11A1P12107 1806 aaPredicted RBP15.57■□□□□ 0.08
PTPRF-202ENST00000372405 POTEMA6NI47 508 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 FOSP01100 380 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-202ENST00000372405 ICAM1P05362 532 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 CUL4BQ13620 913 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 NOL9Q5SY16 702 aaKnown RBP15.56■□□□□ 0.08
PTPRF-202ENST00000372405 LENG9Q96B70 501 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 TANGO6Q9C0B7 1094 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 HSD3B7Q9H2F3 369 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 BLZF1Q9H2G9 400 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 RPAP3Q9H6T3 665 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-202ENST00000372405 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-202ENST00000372405 KCNMB3Q9NPA1 279 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 PTPRFP10586 1907 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 SPDYE3A6NKU9 549 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 BECN2A8MW95 431 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 GOLGA6L19H0YKK7 550 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 CFBP00751 764 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 PLCG1P19174 1290 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 USP14P54578 494 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 TRAF1Q13077 416 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 MCTP2Q6DN12 878 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 MOXD1Q6UVY6 613 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 UIMC1Q96RL1 719 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 SLC38A10Q9HBR0 1119 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 PPP1R9AQ9ULJ8 1098 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 ABCB11O95342 1321 aa15.56■□□□□ 0.08
PTPRF-202ENST00000372405 FAM86B1E9PN63 330 aa15.55■□□□□ 0.08
PTPRF-202ENST00000372405 FLOT1O75955 427 aa15.55■□□□□ 0.08
PTPRF-202ENST00000372405 FAM86B2P0C5J1 330 aa15.55■□□□□ 0.08
PTPRF-202ENST00000372405 PDIA5Q14554 519 aa15.55■□□□□ 0.08
PTPRF-202ENST00000372405 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-202ENST00000372405 FCHSD1Q86WN1 690 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms