RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CCPG1Q9ULG6 757 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 CLEC11AQ9Y240 323 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 PAPPA2Q9BXP8 1791 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 TYRO3Q06418 890 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 KRBA2Q6ZNG9 492 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 USP49Q70CQ1 688 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 CNNM3Q8NE01 707 aa29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 PYM1Q9BRP8 204 aaKnown RBP29.82■■■□□ 2.36
ATPAF1-202ENST00000371937 GCOM1H8Y6P7 765 aaPredicted RBP29.81■■■□□ 2.36
ATPAF1-202ENST00000371937 POLR2MP0CAP2 368 aa29.81■■■□□ 2.36
ATPAF1-202ENST00000371937 LONRF3Q496Y0 759 aa29.81■■■□□ 2.36
ATPAF1-202ENST00000371937 ZNF536O15090 1300 aa29.81■■■□□ 2.36
ATPAF1-202ENST00000371937 SOCS7O14512 581 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 EDIL3O43854 480 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 XRCC6P12956 609 aaKnown RBP eCLIP29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 TAL1P17542 331 aaPredicted RBP29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 TXLNAP40222 546 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 KANK3Q6NY19 840 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 ARMC9Q7Z3E5 817 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 CCDC34Q96HJ3 373 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 TDP2O95551 362 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 CFBP00751 764 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 PPATQ06203 517 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 CALCRLQ16602 461 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 MOXD1Q6UVY6 613 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 AK8Q96MA6 479 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 AGBL1Q96MI9 1066 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 KIAA1468Q9P260 1216 aa29.8■■■□□ 2.36
ATPAF1-202ENST00000371937 ERO1BQ86YB8 467 aa29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 POTEDQ86YR6 584 aa29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 MTMR9Q96QG7 549 aa29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 DDX25Q9UHL0 483 aaKnown RBP29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 USP25Q9UHP3 1055 aa29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 OTOFQ9HC10 1997 aa29.79■■■□□ 2.36
ATPAF1-202ENST00000371937 VWA5AO00534 786 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 HOXA13P31271 388 aaPredicted RBP29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 COG2Q14746 738 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 PDILTQ8N807 584 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 PANK2Q9BZ23 570 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 SREBF1P36956 1147 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 ARHGAP4P98171 946 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 CATSPERGQ6ZRH7 1159 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 CRYGNQ8WXF5 182 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 ELP3Q9H9T3 547 aa29.78■■■□□ 2.36
ATPAF1-202ENST00000371937 MYH7BA7E2Y1 1941 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 CYP3A7-CYP3A51PA0A087WV96 503 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 SLC37A4O43826 429 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 CYP3A7P24462 503 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 MCF2L2Q86YR7 1114 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 CPXCR1Q8N123 301 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 EHMT1Q9H9B1 1298 aa29.77■■■□□ 2.36
ATPAF1-202ENST00000371937 SMCHD1A6NHR9 2005 aa29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 CAVIN2O95810 425 aa29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 DSG3P32926 999 aa29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 ZRSR1Q15695 479 aaKnown RBP29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 ATG4CQ96DT6 458 aa29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 P2RX7Q99572 595 aaKnown RBP29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 RAVER2Q9HCJ3 691 aaKnown RBP29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 HOXC10Q9NYD6 342 aa29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.76■■■□□ 2.35
ATPAF1-202ENST00000371937 TMEM266Q2M3C6 531 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 SAMD3Q8N6K7 520 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 RNF214Q8ND24 703 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 SERTAD1Q9UHV2 236 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 ADAMTS5Q9UNA0 930 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 MYPNQ86TC9 1320 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 SPDYE5A6NIY4 337 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 ACTN4O43707 911 aaKnown RBP29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 UBA7P41226 1012 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 OAZ1P54368 228 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 STX1AQ16623 288 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 FCHSD1Q86WN1 690 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 IQUBQ8NA54 791 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 MBOAT7Q96N66 472 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 RAB34Q9BZG1 259 aa29.75■■■□□ 2.35
ATPAF1-202ENST00000371937 CXCL11O14625 94 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 SLFN14P0C7P3 912 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 MOB2Q70IA6 237 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 CEP57L1Q8IYX8 460 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 DHX58Q96C10 678 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 CLMNQ96JQ2 1002 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 CCSER1Q9C0I3 900 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 MAP3K20Q9NYL2 800 aaKnown RBP29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 PARP14Q460N5 1801 aa29.74■■■□□ 2.35
ATPAF1-202ENST00000371937 CYP3A4P08684 503 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 ALAS1P13196 640 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 TXKP42681 527 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 FXR2P51116 673 aaKnown RBP eCLIP29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 CNKSR2Q8WXI2 1034 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 TBC1D5Q92609 795 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 OTUD5Q96G74 571 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 A0A087X0B3 334 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 MARCH6O60337 910 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 HSD17B4P51659 736 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 MAP1SQ66K74 1059 aaPredicted RBP29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 IGSF22Q8N9C0 903 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 CLEC4DQ8WXI8 215 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 RRAGCQ9HB90 399 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 ANO10Q9NW15 660 aa29.73■■■□□ 2.35
ATPAF1-202ENST00000371937 UNCXA6NJT0 531 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms