RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 POLR2MP0CAP2 368 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 NSMFQ6X4W1 530 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 FCHSD1Q86WN1 690 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 MCF2L2Q86YR7 1114 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 RIOX2Q8IUF8 465 aa12.52□□□□□ -0.41
BRCC3-204ENST00000369462 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 MOV10L1Q9BXT6 1211 aaKnown RBP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 FTOQ9C0B1 505 aaKnown RBP eCLIP12.52□□□□□ -0.41
BRCC3-204ENST00000369462 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 TM4SF4P48230 202 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 GCLCP48506 637 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ERVK-24P63145 666 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 INF2Q27J81 1249 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 CNPY2Q9Y2B0 182 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-204ENST00000369462 KRT85P78386 507 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 NBR1Q14596 966 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRCC3-204ENST00000369462 TKFCQ3LXA3 575 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 RILPL1Q5EBL4 403 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-204ENST00000369462 USP28Q96RU2 1077 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ACAD9Q9H845 621 aa12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ZCCHC17Q9NP64 241 aaKnown RBP12.51□□□□□ -0.41
BRCC3-204ENST00000369462 ERCC3P19447 782 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
BRCC3-204ENST00000369462 CLEC17AQ6ZS10 378 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 FIBPO43427 364 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 HSD17B4P51659 736 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 RNF207Q6ZRF8 634 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 CHST13Q8NET6 341 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
BRCC3-204ENST00000369462 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
BRCC3-204ENST00000369462 SLC25A27O95847 323 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
BRCC3-204ENST00000369462 AP3B2Q13367 1082 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
BRCC3-204ENST00000369462 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 FBXO40Q9UH90 709 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 CPA4Q9UI42 421 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 CLIC4Q9Y696 253 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 A0A0G2JMZ2 1700 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 WNT7AO00755 349 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 VEGFBP49765 207 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 ANKRD35Q8N283 1001 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 PORCNQ9H237 461 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 A1CFQ9NQ94 594 aaKnown RBP12.49□□□□□ -0.41
BRCC3-204ENST00000369462 COL20A1Q9P218 1284 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 TCHHQ07283 1943 aa12.49□□□□□ -0.41
BRCC3-204ENST00000369462 CCNA1P78396 465 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 SF3A1Q15459 793 aaKnown RBP12.48□□□□□ -0.41
BRCC3-204ENST00000369462 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 MCTP2Q6DN12 878 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 SLC30A10Q6XR72 485 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
BRCC3-204ENST00000369462 EFCC1Q9HA90 598 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 TLR2O60603 784 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 GHRHRQ02643 423 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 CRHR2Q13324 411 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 ZNF174Q15697 407 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 FAM110CQ1W6H9 321 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 ANO1Q5XXA6 986 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 NEK8Q86SG6 692 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 CCAR1Q8IX12 1150 aaKnown RBP12.48□□□□□ -0.41
BRCC3-204ENST00000369462 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
BRCC3-204ENST00000369462 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 MAP3K20Q9NYL2 800 aaKnown RBP12.48□□□□□ -0.41
BRCC3-204ENST00000369462 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
BRCC3-204ENST00000369462 SAMD3Q8N6K7 520 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
BRCC3-204ENST00000369462 MROH8Q9H579 483 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 RTEL1Q9NZ71 1219 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 MCM7P33993 719 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 COPB2P35606 906 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 UBXN2AP68543 259 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 CA12O43570 354 aa12.47□□□□□ -0.41
BRCC3-204ENST00000369462 CCNT1O60563 726 aaKnown RBP12.47□□□□□ -0.41
BRCC3-204ENST00000369462 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms