RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 REXO1Q8N1G1 1221 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 FAM13CQ8NE31 585 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 ZNF408Q9H9D4 720 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 TOPAZ1Q8N9V7 1692 aa6.51□□□□□ -1.37
ECHDC1-204ENST00000368292 PHRF1Q9P1Y6 1649 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 TRPM3Q9HCF6 1732 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 ALS2Q96Q42 1657 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 SLC22A31A6NKX4 558 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 PRR33A8MZF0 331 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 ETFBP38117 255 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 CCDC181Q5TID7 509 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 WFDC3Q8IUB2 231 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 NME8Q8N427 588 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 NETO1Q8TDF5 533 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 TNKS2Q9H2K2 1166 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 PIF1Q9H611 641 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 PRDM5Q9NQX1 630 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 CCDC39Q9UFE4 941 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 GTF2IRD1Q9UHL9 959 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 MAPK8IP1Q9UQF2 711 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 HFM1A2PYH4 1435 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 NAIPQ13075 1403 aa6.5□□□□□ -1.37
ECHDC1-204ENST00000368292 SBNO1A3KN83 1393 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 TOMM70O94826 608 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 CEACAM5P06731 702 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 YARSP54577 528 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 NKPD1Q17RQ9 610 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 ZNF662Q6ZS27 426 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 GK5Q6ZS86 529 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 KLHL3Q9UH77 587 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 CEP131Q9UPN4 1083 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 MRVI1Q9Y6F6 885 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 TULP4Q9NRJ4 1543 aa6.49□□□□□ -1.37
ECHDC1-204ENST00000368292 TUBGCP6Q96RT7 1819 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 LRRC37A3O60309 1634 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 MCM4P33991 863 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 ZNF165P49910 485 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 XP32Q5T750 250 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 SPACA3Q8IXA5 215 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 FTSJ3Q8IY81 847 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 SHDQ96IW2 340 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 ANTXR1Q9H6X2 564 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 STK32BQ9NY57 414 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 MAGEC2Q9UBF1 373 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 TPX2Q9ULW0 747 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 TNRC18O15417 2968 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-204ENST00000368292 ARHGEF10O15013 1369 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 WNT11O96014 354 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 ZNF865P0CJ78 1059 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 ITIH2P19823 946 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 BNIP3Q12983 259 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 SERINC3Q13530 473 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 TXNRD1Q16881 649 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 SFRP5Q5T4F7 317 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 SPRED2Q7Z698 418 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 CKAP2LQ8IYA6 745 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 METTL14Q9HCE5 456 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 GMIPQ9P107 970 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 KCNG1Q9UIX4 513 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 CAPN6Q9Y6Q1 641 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 ATP7BP35670 1465 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 NRXN1Q9ULB1 1477 aa6.47□□□□□ -1.37
ECHDC1-204ENST00000368292 OVOS2A0A0G2JMS6 1433 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 OVOS2A0A0J9YW53 1432 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 KLF4O43474 513 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 PEX14O75381 377 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 FAM193AP78312 1265 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 QSER1Q2KHR3 1735 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 LONRF3Q496Y0 759 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ARSHQ5FYA8 562 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 MYOM3Q5VTT5 1437 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 CDCP2Q5VXM1 449 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 OVOS2Q6IE36 1432 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 OVOS1Q6IE37 1185 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ARHGAP27Q6ZUM4 889 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ANKS3Q6ZW76 656 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 SMC5Q8IY18 1101 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 ATG4CQ96DT6 458 aa6.46□□□□□ -1.38
ECHDC1-204ENST00000368292 Q96M66 194 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms