RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 KCNB2Q92953 911 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
SCAF1-201ENST00000360565 TTLL1O95922 423 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 MYL1P05976 194 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 CSF1RP07333 972 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 DPH6Q7L8W6 267 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 SLFN12Q8IYM2 578 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 DPF2Q92785 391 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 ATP2A1O14983 1001 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 TEX33O43247 280 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 TTC31Q49AM3 519 aaPredicted RBP18.02■□□□□ 0.47
SCAF1-201ENST00000360565 UBL4BQ8N7F7 174 aa18.02■□□□□ 0.47
SCAF1-201ENST00000360565 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 BCRP11274 1271 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 ZBED6P86452 979 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 EHHADHQ08426 723 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 MAN2A1Q16706 1144 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
SCAF1-201ENST00000360565 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 GBP6Q6ZN66 633 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 CHURC1Q8WUH1 139 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 DDX12PQ92771 950 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 KIFAP3Q92845 792 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 CCDC17Q96LX7 622 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 FAM178BQ8IXR5 827 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
SCAF1-201ENST00000360565 SENP2Q9HC62 589 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 ADGRB2O60241 1585 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 RCAN1P53805 252 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 SYCE1Q8N0S2 351 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 AMNQ9BXJ7 453 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 COL4A3BPQ9Y5P4 624 aa18.01■□□□□ 0.47
SCAF1-201ENST00000360565 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 BBOX1O75936 387 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 NR2F2P24468 414 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 RUFY4Q6ZNE9 571 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 STK17AQ9UEE5 414 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 TRIM49BA6NDI0 452 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 H2AFZP0C0S5 128 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 H2AFVQ71UI9 128 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
SCAF1-201ENST00000360565 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
SCAF1-201ENST00000360565 DMTNQ08495 405 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 TMEM47Q9BQJ4 181 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18■□□□□ 0.474e-7■■■■■ 28.5
SCAF1-201ENST00000360565 AMFRQ9UKV5 643 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 AK9Q5TCS8 1911 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 TMEM131LA2VDJ0 1609 aa18■□□□□ 0.47
SCAF1-201ENST00000360565 ATP8B1O43520 1251 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 EXOC3L4Q17RC7 722 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 KRT71Q3SY84 523 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 FAM84BQ96KN1 310 aaPredicted RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 GRAPQ13588 217 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 UBE2SQ16763 222 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 GRAPLQ8TC17 118 aaPredicted RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 CEP83Q9Y592 693 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 VIMP08670 466 aaKnown RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 CXCR5P32302 372 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 PDE6BP35913 854 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 MPHOSPH6Q99547 160 aaKnown RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 THAP9Q9H5L6 903 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 METTL14Q9HCE5 456 aaKnown RBP17.99■□□□□ 0.47
SCAF1-201ENST00000360565 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
SCAF1-201ENST00000360565 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 PRCPP42785 496 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 IFT74Q96LB3 600 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 MED4Q9NPJ6 270 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 RIC8AQ9NPQ8 531 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 KRIT1O00522 736 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 MB21D1Q8N884 522 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 NHEJ1Q9H9Q4 299 aaPredicted RBP17.98■□□□□ 0.47
SCAF1-201ENST00000360565 SAMD15Q9P1V8 674 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
SCAF1-201ENST00000360565 TCP10L2B9ZVM9 353 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 KCNQ2O43526 872 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 EIF4A3P38919 411 aaKnown RBP17.98■□□□□ 0.47
SCAF1-201ENST00000360565 MCTP2Q6DN12 878 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 USP49Q70CQ1 688 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 NDST4Q9H3R1 872 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 ASIC3Q9UHC3 531 aa17.98■□□□□ 0.47
SCAF1-201ENST00000360565 FBXO2Q9UK22 296 aaPredicted RBP17.98■□□□□ 0.47
SCAF1-201ENST00000360565 A6NNZ2 444 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 APBA3O96018 575 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 FOSP01100 380 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 CCZ1BP86790 482 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 CCZ1P86791 482 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 MIER3Q7Z3K6 550 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 GUCY2DQ02846 1103 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 CEP57Q86XR8 500 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 CCDC105Q8IYK2 499 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 GPATCH11Q8N954 259 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms