RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 KLRC3Q07444 240 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 DLGAP5Q15398 846 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 CDC37Q16543 378 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 UBE2SQ16763 222 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 APTXQ7Z2E3 356 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 ADSSL1Q8N142 457 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 OGFOD1Q8N543 542 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 GMLQ99445 158 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 ADD3Q9UEY8 706 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 LIMA1Q9UHB6 759 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-203ENST00000359895 H7C1D1 291 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 GDF11O95390 407 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 TDP2O95551 362 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 HOXA7P31268 230 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 PRCPP42785 496 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 CEP135Q66GS9 1140 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 FAM151AQ8WW52 585 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 MMTAG2Q9BU76 263 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■■ 52.9
PDLIM7-203ENST00000359895 PCDHA1Q9Y5I3 950 aa20.56■□□□□ 0.88
PDLIM7-203ENST00000359895 USP27XA6NNY8 438 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 PSMD14O00487 310 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 SLC37A4O43826 429 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 EDIL3O43854 480 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 DPEP1P16444 411 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 AP3B2Q13367 1082 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 FKBP1CQ5VVH2 108 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 E4F1Q66K89 784 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 GIMAP8Q8ND71 665 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 PLIN2Q99541 437 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 AMNQ9BXJ7 453 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 LRRC27Q9C0I9 530 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 ZNF70Q9UC06 446 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 DDX25Q9UHL0 483 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 GDAQ9Y2T3 454 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 LRRC10BA6NIK2 292 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 PSMA7O14818 248 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 ARHGAP6O43182 974 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 SLC26A4O43511 780 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 NDUFB10O96000 172 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 GH2P01242 217 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 KCNA3P22001 575 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 USP11P51784 963 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 SHROOM1Q2M3G4 852 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 BTNL9Q6UXG8 535 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 NOC3LQ8WTT2 800 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 DHTKD1Q96HY7 919 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 TRIM9Q9C026 710 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 ARHGEF10LQ9HCE6 1279 aa20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 TRMT1Q9NXH9 659 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-203ENST00000359895 RAD17O75943 681 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 BMP3P12645 472 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 TRAF1Q13077 416 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 SYDE2Q5VT97 1194 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 KRT79Q5XKE5 535 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 SV2BQ7L1I2 683 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 TEX2Q8IWB9 1127 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 MTMR14Q8NCE2 650 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 AGBL3Q8NEM8 1001 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 EXOC1Q9NV70 894 aa20.54■□□□□ 0.88
PDLIM7-203ENST00000359895 ITIH6Q6UXX5 1313 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 TCP10L2B9ZVM9 353 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 RIOK3O14730 519 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 STX10O60499 249 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 POLD1P28340 1107 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 PBX1P40424 430 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 GRB10Q13322 594 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 SPDYE2Q495Y8 402 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 MOXD1Q6UVY6 613 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 PPFIBP1Q86W92 1011 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 FBXO11Q86XK2 927 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 TC2NQ8N9U0 490 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 LRRC15Q8TF66 581 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 PPP1R13BQ96KQ4 1090 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
PDLIM7-203ENST00000359895 MARCH6O60337 910 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 ASIC1P78348 528 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 KRT31Q15323 416 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 COBLL1Q53SF7 1204 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 BAG1Q99933 345 aaPredicted RBP20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 THAP9Q9H5L6 903 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 COL4A5P29400 1685 aa20.52■□□□□ 0.88
PDLIM7-203ENST00000359895 CYP3A7-CYP3A51PA0A087WV96 503 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 BICDL2A1A5D9 508 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 KCNJ18B7U540 433 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 AKR1B15C9JRZ8 316 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 ZSCAN12O43309 604 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 FOSP01100 380 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 CYP3A7P24462 503 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 COPB1P53618 953 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 PDE4DQ08499 809 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 KCNJ12Q14500 433 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 TCP11X2Q5H9J9 407 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 CNNM4Q6P4Q7 775 aa20.51■□□□□ 0.87
PDLIM7-203ENST00000359895 TMEM139Q8IV31 216 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms