RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FAM178BQ8IXR5 827 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 METTL14Q9HCE5 456 aaKnown RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 ACTN1P12814 892 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 LMNB1P20700 586 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 PARD3BQ8TEW8 1205 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 MRFAP1L1Q96HT8 127 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 RMDN2Q96LZ7 410 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 MAP3K7O43318 606 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 MOCS3O95396 460 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 BRD1O95696 1058 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 COPB1P53618 953 aaKnown RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 PPP4R4Q6NUP7 873 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 SLC4A7Q9Y6M7 1214 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 ALAS1P13196 640 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 GNL1P36915 607 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 PLTPP55058 493 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 SMYD4Q8IYR2 804 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 GJA10Q969M2 543 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 SPATA17Q96L03 361 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 PDZD4Q76G19 769 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 N4BP2L2Q92802 583 aaPredicted RBP17.46■□□□□ 0.39
COL18A1-203ENST00000359759 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 INPP5FQ9Y2H2 1132 aa17.46■□□□□ 0.39
COL18A1-203ENST00000359759 MAST3O60307 1309 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 IQCB1Q15051 598 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 CYTH2Q99418 400 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 H2AFZP0C0S5 128 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 ETF1P62495 437 aaKnown RBP17.45■□□□□ 0.38
COL18A1-203ENST00000359759 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 H2AFVQ71UI9 128 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 THOC1Q96FV9 657 aaKnown RBP17.45■□□□□ 0.38
COL18A1-203ENST00000359759 KIF9Q9HAQ2 790 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 A0A087WWV3 80 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 NSFP46459 744 aaKnown RBP17.45■□□□□ 0.38
COL18A1-203ENST00000359759 ZBTB8OSQ8IWT0 167 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 BBOF1Q8ND07 529 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 CDC26Q8NHZ8 85 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 DMP1Q13316 513 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-203ENST00000359759 E2F4Q16254 413 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 RYBPQ8N488 228 aaPredicted RBP17.45■□□□□ 0.38
COL18A1-203ENST00000359759 CEP19Q96LK0 163 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 ZMYM6O95789 1325 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 PFDN6O15212 129 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 ESRRGP62508 458 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 SLC7A5Q01650 507 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 EXOC3L4Q17RC7 722 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 HAUS4Q9H6D7 363 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
COL18A1-203ENST00000359759 CPP00450 1065 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 OR52Z1P0C646 297 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 TMEM191BP0C7N4 346 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 HESX1Q9UBX0 185 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 H7C1D1 291 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 ZNF500O60304 480 aaPredicted RBP17.44■□□□□ 0.38
COL18A1-203ENST00000359759 N4BP1O75113 896 aaKnown RBP17.44■□□□□ 0.38
COL18A1-203ENST00000359759 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 CSRNP1Q96S65 589 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 SCOCQ9UIL1 159 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 HEXIM1O94992 359 aaKnown RBP17.44■□□□□ 0.38
COL18A1-203ENST00000359759 ADD1P35611 737 aaKnown RBP17.44■□□□□ 0.38
COL18A1-203ENST00000359759 MSH2P43246 934 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 DMTNQ08495 405 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 SPATA1Q5VX52 437 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 DSCC1Q9BVC3 393 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
COL18A1-203ENST00000359759 A0A0D9SFI3 127 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 FTCDO95954 541 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 POLA2Q14181 598 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 KLHL29Q96CT2 875 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
COL18A1-203ENST00000359759 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
COL18A1-203ENST00000359759 MAML1Q92585 1016 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 KRT10P13645 584 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 POLGP54098 1239 aaPredicted RBP17.43■□□□□ 0.38
COL18A1-203ENST00000359759 SGO2Q562F6 1265 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 CCNYQ8ND76 341 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 PALM3A6NDB9 673 aaPredicted RBP17.43■□□□□ 0.38
COL18A1-203ENST00000359759 USP17L12C9JPN9 530 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 USP17L21D6R901 530 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
COL18A1-203ENST00000359759 ART3Q13508 389 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 HNRNPCL2B2RXH8 293 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 HNRNPCL1O60812 293 aaKnown RBP17.43■□□□□ 0.38
COL18A1-203ENST00000359759 MAPK4P31152 587 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 KRT80Q6KB66 452 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 SLFN12Q8IYM2 578 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 UBN1Q9NPG3 1134 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms