RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 CDC37Q16543 378 aaPredicted RBP20.85■□□□□ 0.93
RBM38-202ENST00000344785 CEP135Q66GS9 1140 aa20.85■□□□□ 0.93
RBM38-202ENST00000344785 IRF2BP1Q8IU81 584 aa20.85■□□□□ 0.93
RBM38-202ENST00000344785 BLOC1S4Q9NUP1 217 aa20.85■□□□□ 0.93
RBM38-202ENST00000344785 PCDHA1Q9Y5I3 950 aa20.85■□□□□ 0.93
RBM38-202ENST00000344785 MYH7BA7E2Y1 1941 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 DYNC1I1O14576 645 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 DHX8Q14562 1220 aaKnown RBP20.84■□□□□ 0.93
RBM38-202ENST00000344785 KIAA1755Q5JYT7 1200 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 LARGE2Q8N3Y3 721 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 ZNF592Q92610 1267 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 PSMD1Q99460 953 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 TRIM9Q9C026 710 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 RMND1Q9NWS8 449 aa20.84■□□□□ 0.93
RBM38-202ENST00000344785 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
RBM38-202ENST00000344785 FXR2P51116 673 aaKnown RBP eCLIP20.83■□□□□ 0.935e-6■■□□□ 12.9
RBM38-202ENST00000344785 MRPL12P52815 198 aaKnown RBP20.83■□□□□ 0.93
RBM38-202ENST00000344785 ORC2Q13416 577 aaPredicted RBP20.83■□□□□ 0.93
RBM38-202ENST00000344785 KCNB1Q14721 858 aa20.83■□□□□ 0.93
RBM38-202ENST00000344785 KRT31Q15323 416 aa20.83■□□□□ 0.93
RBM38-202ENST00000344785 HPS3Q969F9 1004 aa20.83■□□□□ 0.93
RBM38-202ENST00000344785 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.83■□□□□ 0.93
RBM38-202ENST00000344785 LRWD1Q9UFC0 647 aa20.83■□□□□ 0.93
RBM38-202ENST00000344785 CCT6AP40227 531 aaKnown RBP20.83■□□□□ 0.92
RBM38-202ENST00000344785 ECE1P42892 770 aa20.83■□□□□ 0.92
RBM38-202ENST00000344785 SPICE1Q8N0Z3 855 aa20.83■□□□□ 0.92
RBM38-202ENST00000344785 GIMAP8Q8ND71 665 aaPredicted RBP20.83■□□□□ 0.92
RBM38-202ENST00000344785 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.92
RBM38-202ENST00000344785 CNTNAP1P78357 1384 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 MEIS2O14770 477 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 KCNJ6P48051 423 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 ECM1Q16610 540 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 PPP4R3BQ5MIZ7 849 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 PPP4R3AQ6IN85 833 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 KCNK18Q7Z418 384 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 RTKN2Q8IZC4 609 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 GMCL1P1Q8NEA9 526 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 PSME4Q14997 1843 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 LRRC10BA6NIK2 292 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 STK4Q13043 487 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 RBM26Q5T8P6 1007 aaKnown RBP20.82■□□□□ 0.92
RBM38-202ENST00000344785 C7orf25Q9BPX7 421 aa20.82■□□□□ 0.92
RBM38-202ENST00000344785 LIMA1Q9UHB6 759 aaKnown RBP20.82■□□□□ 0.92
RBM38-202ENST00000344785 DDX25Q9UHL0 483 aaKnown RBP20.82■□□□□ 0.92
RBM38-202ENST00000344785 SMCHD1A6NHR9 2005 aa20.81■□□□□ 0.92
RBM38-202ENST00000344785 PSDA5PKW4 1024 aaPredicted RBP20.81■□□□□ 0.92
RBM38-202ENST00000344785 FCER1AP12319 257 aa20.81■□□□□ 0.92
RBM38-202ENST00000344785 ACER1Q8TDN7 264 aa20.81■□□□□ 0.92
RBM38-202ENST00000344785 CUEDC2Q9H467 287 aa20.81■□□□□ 0.92
RBM38-202ENST00000344785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.922e-8■■■■■ 42.2
RBM38-202ENST00000344785 MYL1P05976 194 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 RBL2Q08999 1139 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 MCM6Q14566 821 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 EEF2KMTQ96G04 330 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 GMCL1Q96IK5 515 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 VPS16Q9H269 839 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 SCAF8Q9UPN6 1271 aaKnown RBP20.8■□□□□ 0.92
RBM38-202ENST00000344785 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 TCP11X2Q5H9J9 407 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 TAB2Q9NYJ8 693 aa20.8■□□□□ 0.92
RBM38-202ENST00000344785 MYMKA6NI61 221 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 RNF225M0QZC1 329 aaPredicted RBP20.79■□□□□ 0.92
RBM38-202ENST00000344785 OPLAHO14841 1288 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 PDIA5Q14554 519 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 DLGAP5Q15398 846 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 USH1GQ495M9 461 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 REXO1L1PQ8IX06 675 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 CCDC112Q8NEF3 446 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 CPLX3Q8WVH0 158 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 BAG1Q99933 345 aaPredicted RBP20.79■□□□□ 0.92
RBM38-202ENST00000344785 KCNJ18B7U540 433 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 COPB1P53618 953 aaKnown RBP20.79■□□□□ 0.92
RBM38-202ENST00000344785 KCNJ12Q14500 433 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 TTI2Q6NXR4 508 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 CREBRFQ8IUR6 639 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 CALML4Q96GE6 196 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 DUSP9Q99956 384 aaKnown RBP20.79■□□□□ 0.92
RBM38-202ENST00000344785 TMEM39BQ9GZU3 492 aa20.79■□□□□ 0.92
RBM38-202ENST00000344785 FANCGO15287 622 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 BMP3P12645 472 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 ASIC1P78348 528 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 PDE4DQ08499 809 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 MTF1Q14872 753 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 TOGARAM2Q6ZUX3 1019 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 FAM151AQ8WW52 585 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 MAGEF1Q9HAY2 307 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 COL2A1P02458 1487 aaPredicted RBP20.78■□□□□ 0.92
RBM38-202ENST00000344785 ARFGEF1Q9Y6D6 1849 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 NKRFO15226 690 aaKnown RBP eCLIP20.78■□□□□ 0.923e-7■■■□□ 15.5
RBM38-202ENST00000344785 BAG6P46379 1132 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 SYDE2Q5VT97 1194 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 KIAA0895Q8NCT3 520 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 SNX29Q8TEQ0 813 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 CRYGNQ8WXF5 182 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 CTAGE1Q96RT6 745 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 ANO3Q9BYT9 981 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 PAXBP1Q9Y5B6 917 aa20.78■□□□□ 0.92
RBM38-202ENST00000344785 CTIFO43310 598 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms