RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CCDC25Q86WR0 208 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 OTUD6BQ8N6M0 293 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SERPINB13Q9UIV8 391 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 CENPFP49454 3210 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SIPA1L1O43166 1804 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 ARHGAP6O43182 974 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 VEGFAP15692 232 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 KIF5BP33176 963 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 NFIAQ12857 509 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 LETM2Q2VYF4 491 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 SPECC1LQ69YQ0 1117 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 RASGRP4Q8TDF6 673 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 FGRP09769 529 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
CAPRIN1-201ENST00000341394 CALM1P0DP23 149 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 CALM2P0DP24 149 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 CALM3P0DP25 149 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 CCT5P48643 541 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 LONRF2Q1L5Z9 754 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 PSMD1Q99460 953 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 SPTLC3Q9NUV7 552 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 MYH8P13535 1937 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 GAKO14976 1311 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 GOLGA6L9A6NEM1 432 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 BUB1O43683 1085 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 TFRCP02786 760 aaKnown RBP11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 TNIP1Q15025 636 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 TOGARAM2Q6ZUX3 1019 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 CEP112Q8N8E3 955 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 MRFAP1L1Q96HT8 127 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 NAPGQ99747 312 aaPredicted RBP11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 TCP11L1Q9NUJ3 509 aa11.65□□□□□ -0.54
CAPRIN1-201ENST00000341394 ORC4O43929 436 aa11.65□□□□□ -0.55
CAPRIN1-201ENST00000341394 HSF2BPO75031 334 aa11.65□□□□□ -0.55
CAPRIN1-201ENST00000341394 SYCP1Q15431 976 aa11.65□□□□□ -0.55
CAPRIN1-201ENST00000341394 PNMA1Q8ND90 353 aa11.65□□□□□ -0.55
CAPRIN1-201ENST00000341394 PPANQ9NQ55 473 aaKnown RBP11.65□□□□□ -0.55
CAPRIN1-201ENST00000341394 ADAMTS3O15072 1205 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 BUB1BO60566 1050 aaPredicted RBP11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 GJC1P36383 396 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 PRMT6Q96LA8 375 aaPredicted RBP11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 EXOC1Q9NV70 894 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 TFR2Q9UP52 801 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 SYNRGQ9UMZ2 1314 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 GSTTP1A0A1W2PQM5 241 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 RASSF7Q02833 373 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 CXCL9Q07325 125 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 APOBEC3HQ6NTF7 200 aaKnown RBP11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 BRAPQ7Z569 592 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 SPAG5Q96R06 1193 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 SELENOSQ9BQE4 189 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 ZNF76P36508 570 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 WDR24Q96S15 920 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
CAPRIN1-201ENST00000341394 GOLGA6CA6NDK9 693 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 GOLGA6DP0CG33 693 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 IQCEQ6IPM2 695 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 FAM76AQ8TAV0 307 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 OSBPL5Q9H0X9 879 aaPredicted RBP11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 GOLGA6AQ9NYA3 693 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 FAM204AQ9H8W3 233 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 RBL2Q08999 1139 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 NELFCDQ8IXH7 590 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 CSRNP1Q96S65 589 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 PSME4Q14997 1843 aa11.63□□□□□ -0.55
CAPRIN1-201ENST00000341394 KRT86O43790 486 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 IRX5P78411 483 aaPredicted RBP11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 TROAPQ12815 778 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 LINC00301Q8NCQ3 95 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 CCDC114Q96M63 670 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 PI4KBQ9UBF8 816 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 PSMA7O14818 248 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 CYLC1P35663 651 aaPredicted RBP11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 TNNI2P48788 182 aa11.62□□□□□ -0.55
CAPRIN1-201ENST00000341394 RAPGEF1Q13905 1077 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms